Back to Archived Journals » Open Access Bioinformatics
Open Access Bioinformatics ceased publishing in May 2016. All new submissions can be made to Advances and Applications in Bioinformatics and Chemistry. All articles that have been published in Open Access Bioinformatics will continue to be available on the Dove Press site, and will be securely archived with CLOCKSS.
Open Access Bioinformatics
ISSN: 1179-2701
- View all (37)
- Volume 8, 2016 (1)
- Volume 7, 2015 (1)
- Volume 6, 2014 (2)
- Volume 5, 2013 (1)
- Volume 4, 2012 (2)
- Volume 3, 2011 (12)
- Volume 2, 2010 (17)
- Volume 1, 2009 (1)
Journal Articles:
- 37 records -

Computational advances applied to medical image processing: an update
João A, Gambaruto AM, Tiago J, Sequeira A
Open Access Bioinformatics 2016, 8:1-15
Published Date: 29 March 2016

Mediation analysis in genome-wide association studies: current perspectives
Lutz SM, Hokanson JE
Open Access Bioinformatics 2015, 7:1-5
Published Date: 11 November 2015

A review of big data in health care: challenges and opportunities
White SE
Open Access Bioinformatics 2014, 6:13-18
Published Date: 31 October 2014

Genome-wide mapping of chromatin state of mouse forelimbs
Eng D, Vogel WK, Flann NS, Gross MK, Kioussi C
Open Access Bioinformatics 2014, 6:1-11
Published Date: 10 September 2014

Analyzing the basic principles of tissue microarray data measuring the cooperative phenomena of marker proteins in invasive breast cancer
Buerger H, Boecker F, Packeisen J, Agelopoulos K, Poos K, Nadler W, Korsching E
Open Access Bioinformatics 2013, 5:1-21
Published Date: 17 January 2013

Comparative studies of adipose triglyceride lipase genes and proteins: an ancient gene in vertebrate evolution
Holmes RS
Open Access Bioinformatics 2012, 4:15-29
Published Date: 8 March 2012

Reannotation of the Corynebacterium diphtheriae NCTC13129 genome as a new approach to studying gene targets connected to virulence and pathogenicity in diphtheria
D'Afonseca V, Soares SC, Ali A, Santos AR, Pinto AC, Magalhães AAC, Faria CJ, Barbosa E, Guimarães LC, Eslabão M, Almeida SS, Abreu VAC, Zerlotini A, Carneiro AR, Cerdeira LT, Ramos RTJ, Hirata Jr R, Mattos-Guaraldi AL, Trost E, Tauch A, Silva A, Schneider MP, Miyoshi A, Azevedo V
Open Access Bioinformatics 2012, 4:1-13
Published Date: 3 February 2012

Molecular-docking study of capsular regulatory protein in Streptococcus pneumoniae portends the novel approach to its treatment
Thapa S, Zubaer A
Open Access Bioinformatics 2011, 3:131-137
Published Date: 21 December 2011

Using biomedical networks to prioritize gene–disease associations
Arrais JP, Oliveira JL
Open Access Bioinformatics 2011, 3:123-130
Published Date: 25 August 2011

A novel high-throughput analysis approach: immune response-related genes are upregulated in age-related hearing loss
Tra Y, Frisina RD, D'Souza M
Open Access Bioinformatics 2011, 3:107-122
Published Date: 22 August 2011

Predicting cell adhesion receptors using protein sequence index
Wang ZJ, Xu CY, Yu F, Tang L, He JH
Open Access Bioinformatics 2011, 3:97-105
Published Date: 1 June 2011

Vertebrate hepatic lipase genes and proteins: a review supported by bioinformatic studies
Holmes R, VandeBerg JL , Cox LA
Open Access Bioinformatics 2011, 3:85-95
Published Date: 26 April 2011

Information and communication technology skills and resource utilization: preclinical versus clinical medical students in a resource-limited African setting
Eze BI, Mba AU, Ozemena OFN
Open Access Bioinformatics 2011, 3:75-84
Published Date: 20 April 2011

Capsular-type prediction by phylogenetic tree of glycosyltransferase gene polymorphism in Streptococcus pneumoniae
Yuka Tomita, Akira Okamoto, Keiko Yamada, et al
Open Access Bioinformatics 2011, 3:67-73
Published Date: 11 March 2011

Outer membrane protein secretin of type III secretion system of Vibrio vulnificus: structure prediction and orientation
Rama Adiga, Iddya Karunasagar, Indrani Karunasagar
Open Access Bioinformatics 2011, 3:61-66
Published Date: 14 February 2011

Bioinformatic studies of vertebrate enolases: multifunctional genes and proteins
Roger S Holmes
Open Access Bioinformatics 2011, 3:43-59
Published Date: 9 February 2011

In silico identification and characterization of novel drug targets and outer membrane proteins in the fish pathogen Edwardsiella tarda
Mohammed Neema, Iddya Karunasagar, Indrani Karunasagar
Open Access Bioinformatics 2011, 3:37-42
Published Date: 25 January 2011

A predictive tool for foreign body fibrotic reactions using a two-dimensional computational model
Jianzhong Su, Michail Todorov, Humberto Perez Gonzales, et al
Open Access Bioinformatics 2011, 3:19-35
Published Date: 19 January 2011

Statistical analysis of exon lengths in various eukaryotes
Alexander Kaplunovsky, Anatoliy Ivashchenko, Alexander Bolshoy
Open Access Bioinformatics 2011, 3:1-15
Published Date: 19 January 2011

Computational internal sequence repeats analysis of accelerated evolution and the role of extensins under abiotic and biotic stresses
Ramalingam Jothi, Subbiah Parthasarathy, Kulithalai Viswanathan Krishnamurthy
Open Access Bioinformatics 2010, 2:157-168
Published Date: 10 December 2010

Microarray oligonucleotide probe designer: a Web service
Viren C Patel, Kajari Mondal, Amol Carl Shetty, et al
Open Access Bioinformatics 2010, 2:145-155
Published Date: 2 November 2010

A method for ranking compounds based on their relative toxicity using neural networking, C. elegans, axenic liquid culture, and the COPAS parameters TOF and EXT
Martine Ferguson, Marc Boyer, Robert Sprando
Open Access Bioinformatics 2010, 2:139-144
Published Date: 14 October 2010

The interpretation of protein structures based on graph theory and contact map
Mahnaz Habibi, Changiz Eslahchi, Mehdi Sadeghi, et al
Open Access Bioinformatics 2010, 2:127-137
Published Date: 21 September 2010

Computational studies of NMDA receptors: differential effects of neuronal activity on efficacy of competitive and noncompetitive antagonists
Nicolas Ambert, Renaud Greget, Olivier Haeberlé, et al
Open Access Bioinformatics 2010, 2:113-125
Published Date: 24 August 2010

Utility and applications of synoptic reporting in pathology
Waqas Amin, S Joseph Sirintrapun, Anil V Parwani
Open Access Bioinformatics 2010, 2:105-112
Published Date: 10 August 2010

Antigenic epitopes prediction and MHC binder of a paralytic insecticidal toxin (ITX-1) of Tegenaria agrestis (hobo spider)
AG Ingale
Open Access Bioinformatics 2010, 2:97-103
Published Date: 4 August 2010

Increment of diversity with quadratic discriminant analysis – an efficient tool for sequence pattern recognition in bioinformatics
Jun Lu, Liaofu Luo, Lirong Zhang, et al
Open Access Bioinformatics 2010, 2:89-96
Published Date: 4 August 2010

Influence of SMAD1 gene in osteoporosis: A bioinformatics approach
Anand Anabarasu, Arpita Kundu
Open Access Bioinformatics 2010, 2:79-87
Published Date: 22 July 2010

Assessing 3D scores for protein structure fragment mining
Frédéric Guyon, Pierre Tufféry
Open Access Bioinformatics 2010, 2:67-77
Published Date: 14 July 2010

Molecular docking studies on the activity of naturally occurring pyranochalcones on the transcriptional regulator enzyme of Pseudomonas putida
Satya B Paul, Sudip Choudhury
Open Access Bioinformatics 2010, 2:61-66
Published Date: 29 June 2010

Modeling short-term antidepressant responsiveness with artificial neural networks
Eugene Lin, Po See Chen, I Hui Lee, et al
Open Access Bioinformatics 2010, 2:55-60
Published Date: 1 June 2010

Efficiency of a hierarchical protocol for high throughput structure-based virtual screening on GRID5000 cluster grid
Leo Ghemtio, Emmanuel Jeannot, Bernard Maigret
Open Access Bioinformatics 2010, 2:41-53
Published Date: 26 May 2010

Computational methods for the identification of microRNA targets
Yang Dai, Xiaofeng Zhou
Open Access Bioinformatics 2010, 2:29-39
Published Date: 3 May 2010

Refinement of rigid-body protein–protein docking using backbone and side-chain minimization with a coarse-grained model
Albert Solernou, Juan Fernández-Recio
Open Access Bioinformatics 2010, 2:19-27
Published Date: 13 April 2010

Analysis of botulinum neurotoxin serotype A metalloprotease inhibitors: analogs of a chemotype for therapeutic development in the context of a three-zone pharmacophore
James C Burnett, Bing Li, Ramdas Pai, et al
Open Access Bioinformatics 2010, 2:11-18
Published Date: 7 April 2010

Balancing false discovery and false negative rates in selection of differentially expressed genes in microarrays
Byung S Park, Motomi Mori
Open Access Bioinformatics 2010, 2:1-9
Published Date: 23 February 2010

Calculation of the ratio of the mononucleosome mapping number to the dinucleosome mapping number for each nucleotide position in the Aspergillus fumigatus genome
Hiromi Nishida
Open Access Bioinformatics 2009, 1:1-6
Published Date: 9 November 2009