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The Ubiquitin-Proteasome System: A Key Regulatory Hub in Myocarditis Leading to Dilated Cardiomyopathy
Authors Yin X, Wang D, Lyu J, Ding J, Pan Z, Wang K, Guo X
Received 18 May 2025
Accepted for publication 22 September 2025
Published 1 October 2025 Volume 2025:18 Pages 13555—13574
DOI https://doi.org/10.2147/JIR.S541274
Checked for plagiarism Yes
Review by Single anonymous peer review
Peer reviewer comments 2
Editor who approved publication: Dr Durga Misra
Xiang Yin, Dongfei Wang, Jialan Lyu, Jie Ding, Zhicheng Pan, Kai Wang, Xiaogang Guo
Department of Cardiology, The First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, People’s Republic of China
Correspondence: Xiaogang Guo, Department of Cardiology, The First Affiliated Hospital, Zhejiang University School of Medicine, 79 Qingchun Road, Hangzhou, 310003, Zhejiang, People’s Republic of China, Email [email protected]
Abstract: The ubiquitin-proteasome system (UPS), a key regulator of protein quality control essential for maintaining normal biological processes, also plays a vital role in cardiomyopathy. Myocarditis, a myocardial inflammatory disease characterized by chronic inflammation and immune activation, can progress to secondary dilated cardiomyopathy (DCM). Inflammatory DCM is further defined by structural and functional myocardial dysfunction and immune system dysregulation. Given its role in modulating the immune system, the UPS is critical to this transition from myocarditis to DCM. This review focuses primarily on viral myocarditis, summarizing findings on the UPS’s role in inflammation and its contribution to the progression to DCM in both animal models and human studies. We delve into the intricate involvement of the UPS in various processes, including virus replication, host protein degradation, pattern recognition receptor (PRR) signaling, and both innate and adaptive immunity. The molecular mechanisms underlying their context-dependent regulatory duality-wherein individual UPS components exert opposing inhibitory or activating effects across the progression from viral myocarditis to DCM-are elucidated and discussed. Targeting the UPS to ameliorate inflammation offers a potential therapeutic strategy for myocarditis and secondary DCM.
Keywords: ubiquitin-proteasome system, myocarditis, inflammatory dilated cardiomyopathy, inflammation, virus
Introduction
Myocarditis, an inflammatory disease of the myocardium, arises from diverse infectious and noninfectious etiologies, including viral infections, systemic autoimmune disorders, and exposure to toxins or drugs such as immune checkpoint inhibitors (ICIs).1–4 While some individuals make a full recovery, others progress to secondary dilated cardiomyopathy (DCM) and heart failure,5,6 a condition marked by left ventricular systolic dysfunction and ventricular dilation independent of abnormal loading conditions or coronary artery disease.7,8 The transition from acute myocardial inflammation to the chronic remodeling characteristic of DCM presents a significant clinical challenge.
Emerging evidence underscores the critical role of inflammatory processes and immune dysregulation in the progression of myocarditis.9–12 The ubiquitin-proteasome system (UPS), a major intracellular pathway responsible for selectively degrading damaged, misfolded, and regulatory proteins, is central to cellular homeostasis and the regulation of inflammation.13,14 As an essential regulator of cardiac physiology and pathogenesis,15 the UPS is a key player in this transition.
Prior research on the UPS in DCM has predominantly focused on hereditary forms linked to genetic mutations.16 While earlier studies have also explored the role of certain UPS components in viral myocarditis,17,18 a comprehensive and updated understanding of the system’s involvement in the progression from myocarditis to DCM, particularly through the lens of inflammation, is now critical. This review aims to address this gap by providing an updated perspective on the intricate involvement of all key UPS components in modulating the inflammatory pathways that drive this critical transition. Understanding the nuanced functions of the UPS within the inflammatory milieu of myocarditis and its subsequent impact on cardiac remodeling is essential for developing targeted therapeutic strategies for both myocarditis and secondary DCM.
Overview of the UPS
The UPS is a critical cellular machinery pivotal for maintaining cellular homeostasis by regulating protein degradation, thereby preventing the accumulation of misfolded or damaged proteins that can be detrimental to cell function. Ubiquitin-mediated proteolysis is essential for the regulation of diverse cellular processes, including the cell cycle, cell differentiation, signaling transduction, stress response and immune activation.14,15,19 Dysfunction of the UPS is linked to a variety of pathologies, including neoplasia, cardiovascular disorders, immune related diseases and neurodegenerative conditions.20–22
The UPS comprises several key components, including ubiquitin, ubiquitin-activating enzyme (E1), ubiquitin-conjugating enzymes (E2s), and ubiquitin-protein ligases (E3s), as well as the proteasome and deubiquitinases (DUBs) (Figure 1). Ubiquitin, a highly conserved 76-amino-acid polypeptide found across all eukaryotic organisms, plays a critical role in mediating protein degradation through ubiquitination.23 Discovered in 1980, ubiquitination is a complex post-translational modification that occurs via a multi-step enzymatic cascade involving E1, E2s and E3s.24 This process initiates with the activation of ubiquitin by E1, where ATP hydrolysis drives the formation of a thioester bond between a cysteine residue in E1 and the glycine residue at the C-terminus of ubiquitin. Subsequently, activated ubiquitin is transferred to an E2 enzyme, forming another thioester bond at its active site. A crucial step in this proteolytic cascade is the specific recognition of the target substrate by an E3 ubiquitin ligase, which then facilitates the transfer of ubiquitin from the E2 to lysine residues on the target protein, catalyzing the formation of an isopeptide bond and resulting in a ubiquitinated substrate and the generation of a degradation signal.23,25
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Figure 1 The UPS. The UPS mediates protein degradation through a process initiated by Ub conjugation. This ubiquitylation of target proteins is carried out by a sequential enzymatic cascade involving three main enzymes: ubiquitin-activating enzyme (E1), ubiquitin-conjugating enzymes (E2s), and ubiquitin-protein ligases (E3s). Substrates can be modified by monoubiquitination at single or multiple sites, or by the formation of polyubiquitin chains with diverse lengths and linkage types. Notably, ubiquitination is a dynamic modification, while K48- and K11-linked polyubiquitin chains typically target proteins for proteasomal degradation, ubiquitin-conjugated substrates can also be deubiquitinated by DUBs, or participate in cellular signaling events, often regulated by K63-linked ubiquitin chains. Created in BioRender. Yao, J. (2025) https://BioRender.com/nld3vcz. |
Ubiquitination can occur in three primary forms: monoubiquitination, involving the attachment of a single ubiquitin molecule to a substrate and influencing diverse cellular functions like protein trafficking and chromatin remodeling; multi-monoubiquitination, referring to the addition of multiple single ubiquitin molecules to different lysine residues on the same substrate, modulating its activity or localization; and polyubiquitination, characterized by the formation of ubiquitin chains.24,26 These chains are primarily linked through lysine 48 (K48) and lysine 11 (K11), typically signaling for proteasome-mediated protein degradation, whereas chains linked through lysine 63 (K63) are often involved in the clearance of damaged organelles and the regulation of cellular signal transduction.13,27,28 While lysine residues have long been recognized as the primary sites for ubiquitination, recent research has demonstrated that serine, threonine, and cysteine residues can also function as ubiquitination sites, expanding our understanding of this intricate modification.29,30
The 26S proteasome, a large multi-catalytic complex, is responsible for the degradation of ubiquitinated proteins. It comprises a cylindrical 20S core particle that contains the proteolytic sites and is capped by 19S regulatory particles that recognize ubiquitin tags, unfold substrates, and translocate them into the core for degradation.31 DUBs play a crucial role in regulating the ubiquitin pool by removing ubiquitin from substrates, thereby preventing their degradation or modulating their signaling functions.32 Overall, the UPS is essential for various physiological processes, including cell cycle regulation, apoptosis, and immune responses, highlighting its significance in maintaining cellular integrity and function.
The immunoproteasome (IP), a specialized isoform of the proteasome, is constitutively expressed in hematopoietic cells and can be induced in non-hematopoietic cells by proinflammatory cytokines such as interferon (IFN) and tumor necrosis factor (TNF).33 It is formed through the replacement of the standard catalytic subunits (β1, β2, and β5) with inducible immune subunits (β1i/LMP2, β2i/MECL-1, and β5i/LMP7), which modify the proteolytic specificity of the 20S core particle. This alteration enhances chymotrypsin-like activity while reducing caspase-like activity, promoting the generation of hydrophobic C-terminal peptides ideal for MHC class I antigen presentation. Studies demonstrate that the IP exhibits higher catalytic efficiency for proteins with specific residues compared to the standard proteasome. By optimizing antigen processing, this specialized proteasome plays a pivotal role in shaping cytotoxic T lymphocyte responses, pathogen clearance, and immune repertoire diversity during inflammatory and immune challenges.34,35
From Myocarditis to DCM: Pathogenesis
The pathogenesis of myocarditis varies across different types. Viral myocarditis, the predominant form, arises from the immune response against viral infection, triggering a cytokine storm or a cellular immune response via molecular mimicry, ultimately leading to cardiac injury and negative inotropy.1,36 Autoimmune myocarditis can manifest as an isolated cardiac condition or in association with a broad range of systemic autoimmune diseases, where a breakdown in self-tolerance and an increase in autoreactive T cells and autoantibodies are central to its development.37,38 Furthermore, disruption of the programmed death-1 (PD-1) and ligand (PD-L1) axis, which normally promotes immune tolerance in the heart, has been implicated in ICI–induced myocarditis, characterized by a cellular infiltrate predominantly composed of CD8+ T cells interspersed with CD4+ T cells and CD68+ macrophages.3,39 DCM frequently develops following myocarditis; notably, up to 30% of myocarditis cases may progress to DCM, and nearly half of DCM cases exhibit evidence of ongoing myocardial inflammation.36,40,41 The clinical presentation of myocarditis and inflammatory DCM is highly variable, ranging from mild symptoms to severe manifestations such as cardiogenic shock, heart failure and life-threatening arrhythmias. This heterogeneity in clinical course underscores the complex interplay of etiological factors and the dynamic nature of the inflammatory process in the development of inflammatory DCM. The role of inflammation in the progression from myocarditis to DCM has been most extensively and mechanistically elucidated in the context of viral myocarditis.42 Using this model as a prime example, the inflammatory process unfolds in the following phases.
Phase I: Initial Cardiac Injury
Viral infections represent the predominant etiology of acute myocarditis, with enteroviruses, particularly coxsackievirus group B (CVB), historically identified as the most prevalent causative agents. Study have shown that CVB3 infection initiates myocardial injury through direct cytopathic effects mediated by viral proteases 2A and 3C.43 These proteases cleave host proteins, suppressing type I IFN signaling, facilitating viral replication and reducing apoptosis of infected cells. Additionally, CVB3 disrupts mitochondrial function by altering iron homeostasis, leading to ferroptosis and oxidative stress, which further exacerbate cardiomyocyte injury.43 Similar cytopathic effects are observed with adenoviruses, which share the coxsackievirus and adenovirus receptor (CAR) with enteroviruses and also utilize protease-mediated mechanisms (eg, dystrophin cleavage) to damage cardiomyocytes.44 While parvovirus B19 (B19V) exhibits the capacity to infect endothelial cells through its NS1 protein.45 These early events collectively set the stage for subsequent immune activation and inflammation in the heart.
Phase II: Immune Activation and Inflammation
Following initial injury, viral infection triggers robust innate immune responses through pattern recognition receptors (PRRs), including Toll-like receptors (TLRs), NOD-like receptors (NLRs) and RIG-I-like receptors (RLRs).46 Activation of these pathways induces the production of pro-inflammatory cytokines, including TNF-α, interleukin (IL)-6 and IL-1β, which recruit innate immune cells, such as monocytes, macrophages, and neutrophils, to the myocardium.43,46,47 Lymphocytes, particularly T cells, arrive later, with peak infiltration occurring between 7–14 days. Studies using CVB3-infected mouse models have shown that knockout of CD8+ T cells exacerbates myocarditis severity, while the absence of CD4+ T cells or the T cell receptor beta chain attenuates myocarditis and improves murine survival.48 Th1 and Th17 cells play a critical role in amplifying inflammation and tissue damage.49 Regulatory T (Treg) cells, however, exert a protective role against CVB3 myocarditis.50 B cells contribute to myocarditis by producing autoantibodies against cardiac tissues, driving immune-mediated injury. Even after viral clearance, autoimmune responses, including molecular mimicry between viral and cardiac antigens, can sustain inflammation and tissue damage.43 Additionally, cardiac fibroblasts contribute to the immune response by secreting pro-inflammatory cytokines and maintaining viral load, indicating that non-cardiomyocyte cell types also play a role in disease severity.43 This phase is characterized by a cytokine storm and persistent immune cell infiltration, leading to sustained myocardial inflammation.
Phase III: Cardiac Fibrosis and Myocardial Remodeling
Chronic inflammation and unresolved injury culminate in cardiac fibrosis and remodeling. Macrophages and fibroblasts, activated by cytokines such as transforming growth factor-β (TGF-β) and IL-1β, drive excessive collagen deposition and extracellular matrix remodeling.51 Galectin-3 and osteopontin promote fibroblast to myofibroblast differentiation, contributing to scar formation and ventricular stiffness.52 Th17 cells and their associated cytokines, including IL-17A, further exacerbate fibrosis by enhancing pro-fibrotic signaling pathways.49 Mitochondrial dysfunction and oxidative stress persist, impairing cardiomyocyte contractility and promoting apoptosis.53 Over time, these processes lead to DCM. The transition from myocarditis to DCM is marked by irreversible cardiac structural changes and progressive cardiac dysfunction.
The UPS in Virus-Host Interactions in Myocarditis
To investigate the role of the UPS in host-pathogen interactions during the progression from myocarditis to DCM, viral myocarditis stands out as a predominant etiological factor. A diverse range of approximately 20 viruses has been implicated in human myocarditis, highlighting a dynamic interplay between the invading virus and the host.54 While cardiomyocytes and the host immune system actively work to restrict viral replication and induce apoptosis to eliminate the pathogen, viruses have concurrently evolved sophisticated strategies to suppress host antiviral mechanisms and exploit cellular machinery for their own replication and survival. Notably, emerging research underscores the crucial role of host protein degradation systems, particularly the UPS, in various aspects of viral infection, including the regulation of host cell entry, synthesis of viral proteins, and replication of the genome.55–57 The UPS, therefore, represents a critical, double-edged factor in viral pathogenesis, acting both as a target for viral manipulation and a key component of the host’s antiviral arsenal.
Studies have consistently demonstrated an enhancement of protein ubiquitination during cardiotropic virus infection, with localized accumulation of ubiquitinated proteins at viral replication organelles (ROs) being essential for efficient CVB3 replication.58,59 Pharmacological inhibition of the proteasome using inhibitors such as MG132, epoxomicin, and lactacystin has been shown to impede viral infection by disrupting various crucial stages of the viral lifecycle. These stages include endosomal escape of entering virions, intracellular transport of incoming nucleocapsids, and viral genome uncoating.56 Collectively, these findings strongly emphasize the pivotal role of the UPS in the intracellular viral lifecycle, often facilitating its progression.
To further optimize their replication and lifecycle progression, viruses have evolved diverse strategies to manipulate the host UPS. A common tactic involves the degradation of host intracellular proteins, particularly those involved in antiviral defense. For instance, viral replication inhibitor p53 presents a significant barrier to viral propagation, and several viruses target it for UPS-mediated degradation. Adenovirus proteins E1B 55K and E4orf6 form a complex that targets p53 for ubiquitination and subsequent proteasomal degradation.60 Similarly, human papillomavirus (HPV)’s E6 protein, in conjunction with the cellular E6-associated protein, promotes p53 polyubiquitination and degradation.61 Even CVB3 has been shown to manipulate host REGγ, an 11S proteasome activator, to enhance viral replication, notably through REGγ-mediated p53 degradation.62 Beyond p53, viruses also target other host regulatory proteins. CVB3, for example, induces ubiquitin-dependent degradation of cyclin D1, a key regulator of the cell cycle, potentially preventing host cell apoptosis and prolonging infected cell survival, thereby supporting viral replication.63
Conversely, the host can also strategically utilize the UPS to limit viral infection through the targeted degradation of viral components. For example, the host E3 ubiquitin ligase TRIM56 is upregulated during CVB3 infection in mice and targets the viral 3D RNA-dependent RNA polymerase for K48-linked polyubiquitination, leading to its proteasomal degradation and reduced viral yield.64 Upregulated LNX1, a host E3 ubiquitin ligase in cardiomyocytes during CVB3 infection in mice, controls myocarditis by targeting CAR for ubiquitination, thus decreasing CAR expression and limiting viral entry.65 Similarly, in hepatitis B virus (HBV) infection, TRIM21, another host E3 ligase, targets the viral HBx protein for ubiquitination and degradation, ultimately suppressing HBV replication.66 The influenza A virus (IAV) structural protein M2 is targeted by the host E3 ligase MARCH8 for K63-linked polyubiquitination at lysine 78, redirecting it from the cell membrane to lysosomes for degradation, thereby inhibiting IAV release and replication.67 These examples highlight the crucial role of UPS-mediated degradation of viral proteins as a key host defense mechanism against viral infection.
Beyond direct degradation, the UPS can also modulate viral and host protein function through non-degradative ubiquitination, affecting protein localization and interactions. In adenovirus infection, the viral proteins E1B55K/E4orf6 mediate non-degradative ubiquitination of RNA-binding proteins such as RALY and hnRNP-C. This modification alters their interaction with viral RNA, thereby enhancing viral RNA splicing, protein synthesis, and progeny production.68
Furthermore, viral proteins frequently undergo significant functional modulation through post-translational modifications by ubiquitin-like modifiers, including SUMO and ISG15. Ubiquitination can enhance viral budding, replication, and transactivation, or target proteins for degradation, while SUMOylation influences viral protein interactions and replication efficiency.69,70 ISG15, induced by IFN, acts as a potent antiviral modifier, inhibiting viral release and replication through direct conjugation to viral proteins or indirectly by disrupting ubiquitin-dependent processes.71,72 These diverse modifications represent crucial mechanisms by which viruses regulate their lifecycle and hosts defend against infection, underscoring the intricate and multifaceted interplay between viruses and the UPS.
UPS Regulation of PRR Pathways in Myocarditis
During myocarditis, host cell PRRs, including cardiomyocytes and immune cells, detect pathogen-associated molecular patterns (PAMPs) and damage-associated molecular patterns (DAMPs).73,74 This recognition initiates signal transduction cascade, culminating in the production of type I IFNs and pro-inflammatory cytokines, which serve as the primary defense against pathogens.75 These diverse signaling pathways converge on key transcription factors such as nuclear factor κB (NF-κB), activator protein-1 (AP-1) and interferon regulatory factors (IRFs) to induce the expression of a wide array of immune mediators, thereby significantly influencing the pathogenesis of myocarditis and potentially contributing to the development of DCM.76
Under physiological conditions, the UPS maintains a delicate balance in PRR signaling pathways through ubiquitination-mediated proteasomal degradation. This process finely tunes the stability of PRR receptors and essential adaptor proteins, including MyD88 and TRIF.77,78 However, during viral myocarditis, the UPS emerges as a critical and dynamic modulator of the intricate interplay between viral immune evasion strategies and the host’s innate defense mechanisms.
Several lines of evidence highlight the UPS’s role in positively regulating antiviral responses triggered by PRRs. For instance, in the context of CVB3 myocarditis, the E3 ubiquitin ligase TRIM21 has been shown to enhance MAVS-mediated type I IFN production. This enhancement occurs through TRIM21-catalyzed K27-linked polyubiquitination of MAVS, ultimately promoting downstream IRF3 activation, which in turn suppresses viral replication and mitigates cardiac injury.79 Additionally, the IP subunit LMP7 positively regulates the expression of pentraxin 3 (PTX3), then mitigates CVB3-induced inflammatory injury of heart tissue by inhibiting ERK1/2 and p38 MAPK signaling pathways in macrophages.80 Similarly, the E3 ubiquitin ligase Riplet plays a crucial role in RIG-I-mediated innate immune responses against RNA viruses. Studies in Riplet-deficient mice have revealed a severe impairment in the Lys63-linked polyubiquitination of RIG-I, a key post-translational modification essential for initiating antiviral signaling.81 This deficiency leads to markedly reduced production of IFN-α/β and IL-6 following viral infection, rendering these mice more susceptible to viral challenge, thus underscoring the in vivo significance of Riplet in regulating RIG-I-mediated immunity.81
Conversely, the UPS also functions to negatively regulate innate immunity, and limit antiviral responses. One example of this is the E3 ubiquitin ligase TRIM18, which has been shown to recruit protein phosphatase 1A (PPM1A) to dephosphorylate and inactivate TBK1 in macrophages, and this action dampens both MAVS- and STING-dependent antiviral signaling pathways.82 Notably, the deletion of TRIM18 protects mice from viral myocarditis, suggesting a mechanism by which the UPS can suppress PRR signaling in the host’s defense against viral invasion.82
NF-κB, a central transcription factor downstream of multiple PRRs, is also subject to tight regulation by the UPS in the context of myocarditis pathogenesis. The E3 ubiquitin ligase mitsugumin 53 (MG53), a member of the TRIM family, has been shown to inhibit NLRP3 inflammasome-mediated pyroptosis by suppressing NF-κB signaling in cardiomyocytes, thereby protecting against CVB3-induced myocardial injury.83 Similarly, the E3 ubiquitin ligase parkin directly modulates NF-κB activation in a mouse model of CVB3 myocarditis. In parkin-deficient mice, NF-κB signaling is dysregulated, leading to diminished production of antiviral cytokine IFN-γ, and decreased expression of pro-inflammatory cytokines TNF-α and IL-1β.84 Pathogenic PARKIN (PRKN) mutations predispose individuals to myocarditis and DCM in the clinic.84 Consistent with these findings, pharmacological inhibition of the UPS using MG-132 has demonstrated the ability to alleviate CVB3 myocarditis in mice by reducing the expression of TNF-α and IL-6, ultimately improving survival rates and attenuating myocardial damage.85,86 The IP itself also exhibits a complex role in NF-κB signaling during myocarditis. While IP formation can contribute to protection against excessive inflammatory damage in a pro-inflammatory environment, studies in IP-deficient mice with CVB3 myocarditis have revealed impaired NF-κB activation in cardiomyocytes and inflammatory cells, coupled with proteotoxic stress and severe inflammation, leading to intensified apoptotic cell death and acute tissue damage.87 However, it is important to note that the efficacy of IP inhibitors on CVB3-triggered inflammation remains controversial and appears to be dependent on the specific mouse strain and the overall immune background of the model.88–90
Intriguingly, viruses themselves have evolved sophisticated strategies to manipulate the host UPS to evade detection and the activation of PRR-mediated immune responses. Epstein-Barr virus (EBV), a virus also associated with cardiac pathology, encodes the BPLF1 DUB. BPLF1 has been shown to attenuate TLR-mediated NF-κB activation by specifically deubiquitinating TRAF6, highlighting a conserved viral tactic to subvert host immunity by targeting the UPS.91 Similarly, herpesviruses, such as herpes simplex virus type 1 (HSV-1), evade immune surveillance and killing, and ensure survival by employing viral proteins that target host immune pathways.92 For instance, HSV-1 inhibits the IFI16 and NLRP3 inflammasome responses.93 Moreover, the viral protein ICP0, mimicking an E3 ubiquitin ligase, degrades p50 and suppresses NF-κB-dependent gene expression,94 another viral protein UL36, which functions as a DUB, deubiquitinating TRAF3 to block TBK1 recruitment and consequently IFN-β production.95
In conclusion, the UPS exhibits a dual and context-dependent role in regulating antiviral immunity during myocarditis by modulating PRR signaling (Figure 2). Viruses also manipulate the UPS to evade host defenses. Understanding this intricate interplay is crucial for developing targeted therapies against viral myocarditis and its progression to DCM.
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Figure 2 Diagram illustrating the UPS regulation of PRR pathways in myocarditis. The UPS functions to positively (red) or negatively (green) regulate antiviral responses triggered by PRRs in this context. This figure was Created in BioRender. Yao, J. (2025) https://BioRender.com/nld3vcz. |
Interaction of Innate Immunity and the UPS in Myocarditis and Secondary DCM
Macrophages
Macrophages are crucial for the initial immune response in myocarditis and inflammatory DCM. In acute myocarditis, pro-inflammatory M1 macrophages exacerbate inflammation, while anti-inflammatory and pro-fibrotic M2 macrophages initially attenuate inflammation.96 However, during chronic myocarditis and DCM progression, M2 macrophages contribute to fibrotic ventricular remodeling by promoting collagenogenesis and angiogenesis.97 The multifaceted functions of macrophages, including recruitment, infiltration, survival, activation, and polarization, are tightly regulated by the UPS in both physiological processes and cardiac diseases (Figure 3).98–100
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Figure 3 The UPS plays a vital role in regulating the functions of immune cells. The immune cells, including macrophages, dendritic cells, NK cells, T cells, and B cells, are crucial for maintaining homeostasis. The UPS modulates both physiological and pathological processes within these immune cells, representing a complex interaction network. This figure was Created in BioRender. Yao, J. (2025) https://BioRender.com/nld3vcz. |
Studies have highlighted the pivotal role of UPS-regulated macrophage functions in PAMP infections.80,101–103 Macrophage survival is modulated by S-phase kinase-associated protein (SAG), a key UPS component, SAG-mediated ubiquitination of Bax and sterile α- and HEAT/armadillo-motif-containing protein (SARM) enhances macrophage survival upon PAMP exposure.101 SAG-overexpressing macrophages challenged with PAMPs exhibited increased expression of pro-inflammatory cytokines (IL-1β, IL-6, and TNF-α) and decreased expression of the anti-inflammatory cytokine IL-10, indicating that the SAG-dependent UPS acts as a crucial regulator of the balance between immune defense and apoptosis.101 Furthermore, in lipopolysaccharide (LPS)-induced TLR2 signaling, praja2-mediated ubiquitination of malignant fibrous histiocytoma amplified sequence 1 (MFHAS1) promotes M1 macrophage polarization by activating the JNK and p38 signaling pathways.102 Additionally, the UPS also regulates the PRR signal pathway and downstream cytokine release in macrophage during CVB3 and betacoronavirus infection.80,103
While knowledge regarding the impact of the UPS on macrophage function in DCM is still emerging, data are primarily available from myocarditis models. One study demonstrated that the IP (i20S) inhibitor ONX 0914 mitigates CVB3 myocarditis in A/J mice, partly by modulating monocyte dynamics, specifically, ONX 0914 significantly increased circulating and splenic Ly6Chigh monocytes while reducing their myocardial accumulation.88 Macrophages, a type of mononuclear phagocyte, may originate from inflammatory monocytes during infection.104 Importantly, ONX 0914 enhanced macrophage phagocytic capacity without expanding cardiac macrophage populations, suggesting improved clearance of infected cell debris.88 This dissociated regulation of macrophage mobilization versus tissue recruitment represents a novel therapeutic strategy to mitigate viral myocarditis immunopathology. In a murine experimental autoimmune myocarditis (EAM) model, UPS-mediated degradation of serine/arginine-rich splicing factor 1 (SRSF1) leads to NF-κB activation, M1 macrophage polarization and recruitment, this cascade of events promotes cardiac inflammation during the acute phase of EAM and ultimately exacerbates ventricular remodeling and impairs cardiac function in chronic EAM model mice.100 Therefore, the UPS appears to aggravate inflammation by modulating macrophage function in both CVB3 and autoimmune myocarditis.
However, the UPS exerts opposing functions in other cardiac diseases. For instant, cardiac injury resulting from ICIs is a life-threatening immune-related adverse event in cancer patients, PD-1 inhibition triggers myocarditis through the activation of the NLRP3 signaling pathway and the promotion of M1 macrophage polarization.105 In contrast, the ubiquitin-autophagy pathway degrades NLRP3 inflammasomes, resulting in the gradual resolution of inflammation and the transition of M1 macrophages to the M2 phenotype.105 HectD3, an E3 ubiquitin ligase, mitigates LPS-/IFN-γ-induced inflammatory responses and reduces the secretion of chemoattractant factors in cardiomyocytes, subsequently diminishing macrophage migration into the cardiac tissue in myocardial hypertrophy models.106 Furthermore, in both sepsis-induced acute myocardial injury and isoproterenol-induced inflammatory heart remodeling models, the UPS, involving the E3 ubiquitin ligase COP1 and OTUD1, inhibits macrophage inflammatory responses and cardiac remodeling, respectively.107,108 Single-cell data from DCM patients revealed that macrophages sending pro-fibrotic signals exhibit activated TLR/TNF/ERK pathways and upregulated transcription factors, driven by key gene clusters. Notably, highly expressed hub genes within these macrophages, linked to ER-associated mRNA/rRNA metabolism and ubiquitination, correlate with upregulated myofibroblast and M1 markers, suggesting UPS involvement in macrophage phenotypic transformation and potential macrophage-to-myofibroblast transition.109 In conclusion, the UPS plays a multifaceted role in regulating macrophage behavior within the context of cardiac inflammation and fibrosis.
Monocytes
During troponin I-induced autoimmune myocarditis (TnI-AM), CD11b+ monocytes are the predominant immune cell infiltrating in the heart, driving pathogenesis through the secretion of pro-inflammatory mediators such as IL-6. This cytokine promotes the expansion and Th17 polarization of self-reactive CD4+ T cells.110 Critically, monocyte activation is regulated by the IP, which enhances TLR-mediated inflammatory responses, thereby skewing CD4+ T-cell differentiation toward Th17 and Th1 phenotypes while suppressing Treg cells.111 This cascade exacerbates myocardial inflammation, fibrosis, and dysfunction. Pharmacological inhibition of IP activity (eg, ONX 0914) attenuates monocyte-derived cytokine production, mitigating CD4+ T-cell activation and subsequent cardiac damage in TnI-AM mouse model.111 Similarly, ONX 0914 treatment reversed severe pathology in A/J mice, a strain highly susceptible to CVB3 myocarditis, by limiting monocyte/macrophage infiltration into the heart and reducing organ damage.88 However, in CVB3-infected NMRI mice, pre-treatment with ONX 0914 exacerbated viral cytotoxicity in cardiomyocytes and promoted Ly6chigh monocyte infiltration into the heart.89 Mechanistically, ONX 0914 strongly inhibited the standard cardiac proteasome β5 subunit but exhibited weaker inhibition of the IP subunit LMP7.89 These findings in both autoimmune and viral myocarditis highlight the context-dependent role of IP modulation in these inflammatory heart conditions, as its inhibition can lead to either disease attenuation or exacerbation by impacting monocyte phenotype and function. Furthermore, monocytes exhibit both pro-fibrotic and anti-fibrotic phenotypes, which critically influence the outcome of myocarditis.112 Study has shown that WWP2, an E3 ubiquitin ligase, drives cardiac fibrosis in non-ischemic cardiomyopathy by regulating pro-fibrotic Ly6chigh monocytes, mechanically, WWP2 enhances IRF7-mediated CCL5 expression, promoting monocyte infiltration and myofibroblast differentiation.113
Monocytic Myeloid-Derived Suppressor Cells
Monocytic myeloid-derived suppressor cells (mMDSCs) exacerbate viral myocarditis by suppressing antiviral immune functions, a process further modulated by the E3 ubiquitin ligase TRIM29.114,115 Specifically, in a CVB3-infected mouse model, TRIM29 stabilizes PERK via SUMOylation, leading to PERK-mediated endoplasmic reticulum stress. This, in turn, induces immunosuppressive mMDSCs and suppresses antiviral CD8+ T cell functions, ultimately aggravating viral myocarditis.115
Dendritic Cells
Dendritic cells (DCs), pivotal antigen-presenting cells, orchestrate both adaptive and innate immune responses. In murine models, immunization with cardiac myosin induces myocarditis and DCM through autoantibody activation, triggering a DC-dependent T-cell reaction.116,117 Similarly, DCs drive inflammatory responses in viral myocarditis.118 The UPS critically regulates various DC functions, including MHC class II expression, costimulatory molecule presentation, antigen processing, NF-κB activation, and DC migration (Figure 3).119–121 Notably, viruses have evolved mechanisms to exploit the UPS to evade host immune surveillance. In CVB3-infected mice, UPS disruption leads to the accumulation of DC aggresome-like induced structures (DALISs), impairing MHC class I antigen processing and cross-presentation.122 This results in defective DC activation and maturation, allowing CVB3 to evade immune clearance and contribute to viral persistence and chronic myocarditis.122 Furthermore, OTUB1, an OTU family DUB, enhances NF-κB-dependent inflammatory responses in DCs during PAMP-induced infection and inflammation by stabilizing the E2-conjugating enzyme UBC13 via K48-linked deubiquitination.123 It is important to note that these two studies utilized spleen DCs, which are predominantly myeloid DCs, as their experimental model.122,123 Conversely, TRIM8, through an E3 ubiquitin ligase-independent mechanism, stabilizes pIRF7, promoting virus-induced IFN responses in human plasmacytoid DCs.124 These findings suggest that UPS-mediated regulation of DC function may exhibit subtype specificity and pathogen dependency. However, the role of UPS-mediated DC function in DCM remains largely unexplored, necessitating further investigation.
NK Cells
It’s well studied that the UPS finely tunes NK cell activity by regulating both receptor trafficking and intracellular signaling (Figure 3).125–127 Ligand-induced ubiquitination of receptors such as NKG2D-DAP10 triggers their endocytosis and lysosomal degradation, a process essential for controlling cell surface receptor abundance and downstream signaling, including ERK activation, cytotoxic granule release, and IFN-γ production.125 Additionally, the UPS targets key nonreceptor protein tyrosine kinases such as Syk and ZAP-70 for proteasome-mediated degradation following immunoreceptor activation, thereby serving as a negative feedback loop to attenuate signaling.126 While these UPS-mediated regulatory mechanisms in NK cells are well-established, direct evidence demonstrating their specific roles in myocarditis and DCM is currently lacking.
Interaction of Adaptive Immunity and the UPS in Myocarditis and Secondary DCM
Adaptive immunity, primarily mediated by T cells and B cells, plays a critical role in the physiological processes and pathogenesis of myocarditis and DCM. Studies using CVB3-infected severe combined immunodeficiency (SCID) mice, which lack mature T and B cells, demonstrate consistently severe myocarditis, highlighting the importance of adaptive immune cell-regulated homeostasis in suppressing viral-induced inflammation.128 Further evidence comes from the finding that adoptive transfer of peripheral blood lymphocytes from DCM patients induces early-stage cardiac dilation in SCID mice, supporting an autoimmune mechanism in DCM pathogenesis.129 Different subsets of CD4+ T cells also play distinct roles: Th1 and Th17 cells exacerbate acute myocarditis and DCM, whereas CD4+ Treg cells attenuate cardiac inflammation and inhibit the transition to DCM.130 While B cells facilitate early CVB3 spread, their presence is necessary for viral clearance through antibody-mediated mechanisms.131 B cells are also generally implicated in the pathogenesis of myocarditis and DCM by secreting antibodies that target cardiac proteins.
The UPS, acting as both a positive and negative regulator, influences lymphocyte survival, proliferation, differentiation, and function by modulating MHC pathways, key transcription factors, and cytokine-induced signaling cascades (Figure 3).14,22 Notably, the IP, a specialized form of the proteasome, regulates the development of myocarditis and DCM by modulating adaptive immunity.35
CD8+ T Cells
MHC class I-presented peptides are predominantly generated by the IP system.132 IFN-γ enhances this processing by inducing IP formation and the synthesis of the proteasome activator PA28.133 The IP facilitates the release of peptides with hydrophobic or basic C-terminal amino acids, which are typical for MHC class I epitopes.134,135 However, the presence of IP and PA28 can either enhance or inhibit epitope liberation, depending on the specific protein substrate. Although the IP increases the capacity to generate CVB3 epitopes for MHC class I antigen presentation, the CD8+ T cell response during CVB3 infection is generally not robust.136–138 Consistent with this, ONX 0914 treatment, which mitigated CVB3 myocarditis in susceptible A/J mice, was associated with lower expression levels of granzyme A and perforin 1, indicating a reduction in active CD8+ T cells, a population that constitutes a minor component of the infiltrating immune cells.90 These findings align with observations in IP-deficient mice.87
CD4+ T Cells
MHC class II epitopes are efficiently presented following CVB3 infection, leading to the rapid maturation of CD4+ T cells into effector and memory T cells.138 Unlike observations with influenza and vaccinia viruses, a non-canonical cytosolic pathway for MHC class II-restricted antigen processing involving IP-dependent peptide processing is not typically observed in CVB3 or other myocarditis-associated viruses.139 In both CVB3 myocarditis and the TnI-AM mouse model, the IP stimulates the production of chemotactic and pro-inflammatory cytokines, which in turn govern CD4+ T cell differentiation into Th17 and Th1 cells, with a concomitant reduction in Treg cells in autoimmune heart disease.90,111 During murine TnI-AM, treatment with the IP inhibitor ONX 0914 or using LMP7−/− mice attenuates cardiac inflammation and promotes CD4+ T cell differentiation towards a suppressive phenotype, characterized by an increase in Treg cells and higher expression of PD-1 in spleen tissue.111 This effect is also observed during CVB3 myocarditis in A/J mice,90 however, in this case, IP blockade needs to occur before the cytokine-triggered global inflammatory response exacerbates cardiac inflammatory injury. In contrast, data from other mouse strains, such as C57BL/6 and NMRI mice, undergoing CVB3 myocarditis, have shown that treatment with ONX 0914 either had no significant effect or even worsened myocardial inflammation.88,89 These studies reveal profound complexity in myocardial immune microenvironments, with etiology-specific mechanisms driving divergent inflammatory responses across different myocarditis models.
B Cells
Evidence indicates that the UPS modulates diverse B cell functions, including BCR-mediated antigen processing and presentation, B cell development, activation, tolerance, and differentiation.88,140,141 While B cells are crucial in CVB3 infection, the role of the UPS in B cell-mediated pathogenesis of myocarditis and DCM remains unclear, with limited research in this area. Studies in acute CVB3 myocarditis in C57BL/6 and A/J mice showed comparable splenic B cell numbers between LMP7+/+ and LMP7−/− mice.87,90 However, Althof et al reported that ONX 0914 treatment increased titers of CVB3-neutralizing antibodies in A/J mice at 8 days post-infection, accompanied by elevated splenic T lymphocytes.88 This suggests that proteasome inhibition may primarily enhance humoral immunity by promoting B cell differentiation into neutralizing antibody-secreting plasma cells rather than B cell proliferation during CVB3 infection, requiring further investigation. Voigt et al found that cardiac proteasomes, particularly 20S α-subunits, are targets of humoral immunity in DCM patients, with elevated anti-proteasome antibody levels significantly correlating with disease severity and cardiotropic viral persistence.142 Chronic viral myocarditis may initiate this pathogenic cascade through viral disruption of UPS function, exposing immunogenic proteasomal epitopes and triggering autoreactive B cell activation. Thus, the UPS-B cell axis represents a novel mechanistic link between viral infection, impaired protein homeostasis, and humoral autoimmunity in DCM pathogenesis.
The Role of the UPS in Human DCM and Potential Therapeutic Strategies
Research on the human heart, primarily relying on limited tissue samples from end-stage DCM patients undergoing endomyocardial biopsy, left ventricular assist device (LVAD) implantation, or cardiac transplantation, consistently reveals profound alterations in UPS components.143,144 While few studies incorporate biopsies from patients with less advanced disease, a broader understanding across different DCM stage remains a challenge.
A consistent finding across numerous investigations is the increased accumulation and deposition of polyubiquitinated proteins in the failing myocardium of patients with DCM and heart failure compared to controls (Table 1). This accumulation suggests UPS dysfunction and may result from an imbalance between protein synthesis and polyubiquitination rates relative to the efficiency of protein degradation. While the expression of key ubiquitination machinery, including E1 and E2 enzymes and ubiquitin, is often upregulated in heart tissue of patients with DCM and heart failure,145–149 the expression of E3 ubiquitin ligases and DUBs is more context-dependent.143,145–147,150–155 For instance, while E3 ligases muscle atrophy F-box gene (MAFbx) and muscle ring-finger protein-1 (MuRF1) play pivotal roles in cardiomyocyte protein turnover, their expression in DCM is variable across studies, likely influenced by disease etiology and clinical characteristics.147,152–154 Similarly, DUB expression shows divergent patterns, with ubiquitin carboxyl-terminal hydrolase (UCH) and herpesvirus-associated ubiquitin-specific protease (HAUSP) potentially increasing,145,150 while isopeptidase T and ubiquitin-specific protease 5 (USP5) levels are found to decrease.146,151 A critical limitation in interpreting these findings is distinguishing whether the observed changes are a cause of DCM or a compensatory response to ongoing myocardial remodeling.
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Table 1 The Role of the UPS on Human Myocarditis, DCM and Heart Failure |
The mechanisms underlying UPS dysfunction in DCM are multifaceted. In hereditary DCM, which can be caused by mutations in genes for sarcomeric or cytoskeletal proteins,159 a continuous burden of degrading mutant proteins can overwhelm and saturate the UPS. This has been observed in mouse models mimicking hereditary DCM, where the combination of external stress and an overwhelmed system leads to the accumulation of toxic proteins.160 Furthermore, the UPS can be impaired by an altered assembly of the proteasome itself, such as the impaired docking of the 19S to the 20S core particle detected in human end-stage heart failure.155 Other contributing factors include the accumulation of reactive oxygen species (ROS), which can impair UPS function,25,148 and defective protein clearance attributed to impaired autophagy and mitophagy,149,153 two systems that work in concert with the UPS. Post-translational modifications, such as phosphorylation and oxidation, also directly alter the stability and activity of UPS components.27,155 Finally, emerging evidence points to the involvement of autoimmune responses, with anti-proteasome antibodies (ProtAb) potentially causing a direct immune-mediated attack on proteasomes.142
While inhibitors of the proteasome, such as carfilzomib and bortezomib, are clinically used for multiple myeloma, they are known to have significant cardiovascular toxicity.161,162 To our knowledge, no UPS inhibitors are currently in clinical trials for the treatment of myocarditis or DCM. Considering the complex and heterogeneous nature of DCM, a more granular understanding of UPS dysfunction requires future studies to focus on well-defined subtypes rather than broad, undifferentiated cohorts. Further investigation into the pathogenesis of UPS dysfunction in DCM is essential to translate pre-clinical findings into effective therapeutic strategies.
Conclusions and Future Perspectives
The UPS, a key regulator of protein quality control, is essential for maintaining normal biological processes.15,163 In the context of cardiac physiology, the UPS governs cardiomyocyte growth, contraction, cell death, cardiac fibrosis, inflammatory cell infiltration, and the pathogenesis of cardiomyopathies.144 The transition from myocarditis to DCM involves multiple, complex steps linked to the host immune response and a complex interplay of cytokines and chemokines.7,164 This review highlights the critical role of UPS-mediated inflammation in the progression of myocarditis to DCM.
Specifically, this review summarizes the diverse regulatory functions of ubiquitin-specific proteases in myocarditis and DCM, covering virus–host interactions, PRR signaling, innate immunity (involving macrophages, monocytes, MDSCs, DCs, and NK cells), and adaptive immunity (involving CD8+ T cells, CD4+ T cells, and B cells). Although USP functions in myocarditis and DCM have been significantly characterized, the reasons behind their context-dependent regulatory duality, where individual USPs can be both inhibitory and activating across different disease contexts, remain to be fully clarified.
For instance, the protective or aggravating roles of the UPS in myocarditis and secondary DCM are context-dependent, varying with the mouse strain, disease stage, myocarditis model, as reported across different studies (Table 2).87–90,111 In CVB3 myocarditis, IP inhibition with ONX 0914 exacerbated inflammation in C57BL/6 mice by promoting the accumulation of oxidant-damaged proteins in inflamed cells and tissues.87,88 A similar aggravating effect of ONX 0914 in CVB3 myocarditis was observed in NMRI mice, attributed to increased myocardial infiltration of myeloid immune cells.89 Conversely, ONX 0914 exhibited a protective effect against CVB3 myocarditis in A/J mice, dependent on the suppression of systemic inflammatory responses.88,90 Limited research has investigated the role of IP in autoimmune myocarditis, with one study showing that ONX 0914 mitigated autoimmune-related cardiac pathology in a murine model of TnI-AM.111 These studies have provided valuable insights into the roles of proteasome activity in myocarditis and secondary DCM in murine models. While UPS dysfunction has also been observed in DCM patients, no targeted UPS drugs have yet been investigated in clinical trials.
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Table 2 The Effect of the UPS on Animal Models of Myocarditis |
Chronic inflammation leading to cardiac fibrosis and remodeling represents the advanced stages of secondary DCM and heart failure.167 Extensive research has highlighted the significant role of the UPS in cardiac fibrosis development, contributing to DCM progression by modulating TGF-β, p53, AKT1-p38, and JNK1/2 signaling pathways, as well as related pro-fibrotic pathways.21,144 This review focuses on UPS-mediated inflammation in the pathogenesis of myocarditis and secondary DCM, highlighting the crosstalk between inflammation and fibrosis.
However, this summarization does not fully encompass the breadth of this field. The majority of studies reviewed pertain to virus-induced myocarditis, with fewer investigations into autoimmune myocarditis and ICI-related myocarditis. Given that inflammatory DCM is a multifaceted disease with diverse underlying pathophysiological mechanisms extending beyond viral or immune-mediated inflammation, future research should elucidate the regulatory roles of the UPS in a broader range of myocarditis models and their subsequently induced DCM. In conclusion, targeting the UPS to ameliorate inflammation holds potential as a therapeutic strategy for myocarditis and secondary DCM in the future.
Abbreviations
AP-1, activator protein-1; B19V, parvovirus B19; CAR, coxsackievirus and adenovirus receptor; CEBPB, CCAAT/enhancer-binding protein beta; CVB, coxsackievirus group B; DALISs, DC aggresome-like induced structures; DAMPs, damage-associated molecular patterns; DCM, dilated cardiomyopathy; DCs, dendritic cells; DUBs, deubiquitinases; EAM, experimental autoimmune myocarditis; EBV, Epstein-Barr virus; HAUSP, herpesvirus-associated ubiquitin-specific protease; HBV, hepatitis B virus; HPV, human papillomavirus; HSV-1, herpes simplex virus type 1; IAV, influenza A virus; ICIs, immune checkpoint inhibitors; IF, immunofluorescence; IFN, interferon; IHC, immunohistochemistry; IL, interleukin; IP, immunoproteasome; IRFs, interferon regulatory factors; K11, lysine 11; K48, lysine 48; K63, lysine 63; LPS, lipopolysaccharide; LVAD, left ventricular assist device; LVEF, left ventricular ejection fraction; MAFbx, muscle atrophy F-box; MDM2, mouse double minute 2; MFHAS1, malignant fibrous histiocytoma amplified sequence 1; MG53, mitsugumin 53; mMDSCs, monocytic myeloid-derived suppressor cells; MuRF1, muscle ring-finger protein-1; NA, not applicable; NF-κB, nuclear factor κB; NLRs, NOD-like receptors; PAMPs, pathogen-associated molecular patterns; PD-1, programmed death-1; PD-L1, programmed death- ligand 1; PPM1A, protein phosphatase 1A; PRR, pattern recognition receptor; PTX3, pentraxin 3; qPCR, quantitative polymerase chain reaction; RLRs, RIG-I-like receptors; ROs, replication organelles; ROS, reactive oxygen species; SARM, sterile α- and HEAT/armadillo-motif-containing protein; SCID, severe combined immunodeficiency; SRSF1, serine/arginine-rich splicing factor 1; TGF-β, transforming growth factor-β; TLRs, toll-like receptors; TNF, tumor necrosis factor; TnI-AM, troponin I-induced autoimmune myocarditis; Treg, regulatory T; UCH, ubiquitin carboxyl-terminal hydrolase; UPS, ubiquitin-proteasome system; USP5, ubiquitin-specific protease 5; WB, Western blot.
Author Contributions
All authors made a significant contribution to the work reported, whether that is in the conception, study design, execution, acquisition of data, analysis and interpretation, or in all these areas; took part in drafting, revising or critically reviewing the article; gave final approval of the version to be published; have agreed on the journal to which the article has been submitted; and agree to be accountable for all aspects of the work.
Funding
This research was supported by grants from Zhejiang Provincial Natural Science Foundation of China (LQ22H020006) and the National Natural Science Foundation of China (82200294).
Disclosure
The authors declare no conflicts of interest in this work.
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