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Exploring the Bone Marrow Microenvironment as a Therapeutic Barrier and Targetable Source of Crosstalk in Acute Myeloid Leukemia

Authors Kolosova A, Mould IA ORCID logo, Pepper C ORCID logo, Mitchell S, Pepper AG, Ladikou EE, Simoes FA ORCID logo

Received 31 January 2026

Accepted for publication 24 April 2026

Published 19 May 2026 Volume 2026:16 511758

DOI https://doi.org/10.2147/BLCTT.S511758

Checked for plagiarism Yes

Review by Single anonymous peer review

Peer reviewer comments 3

Editor who approved publication: Dr Wilson Gonsalves



Aleksandra Kolosova,1,* Imogen Anna Mould,1,* Chris Pepper,1 Simon Mitchell,1 Andrea GS Pepper,1 Eleni E Ladikou,1,2 Fabio A Simoes1

1Department of Clinical and Experimental Medicine, Brighton and Sussex Medical School, University of Brighton and University of Sussex, Brighton, UK; 2King’s College Hospital NHS Foundation Trust, London, UK

*These authors contributed equally to this work

Correspondence: Fabio A Simoes, Email [email protected]

Abstract: Acute myeloid leukemia (AML) is an aggressive and genetically heterogeneous hematological malignancy characterized by the accumulation of immature myeloid blasts that disrupt healthy hematopoiesis. Despite advances in molecular profiling and targeted therapies, overcoming drug resistance and relapse remains a significant clinical challenge, resulting in poor long-term outcomes. Crucially, disease persistence is sustained not merely by intrinsic genetic lesions but by a highly adaptive bone marrow microenvironment (BMME) that functions as a therapeutic barrier. While the healthy niche tightly regulates hematopoietic stem cell maintenance, leukemic blasts co-opt stromal, vascular, and immune components to establish a sanctuary that fuels proliferation and shields the disease from cytotoxic stress. However, dissecting these reciprocal dependency mechanisms uncovers critical vulnerabilities, presenting a vital opportunity to develop novel targeted therapies. In this review, we discuss the architecture of the healthy BMME and its pathological AML-driven remodeling. We describe the role of specific signaling axes that govern AML-BMME crosstalk and evaluate targeted therapeutic strategies designed to uncouple these protective interactions. Finally, we highlight that current preclinical models lack the complexity of the BMME stromal components and its spatial organization, a limitation that continues to hinder clinical translation and delay the development of effective combination therapies.

Plain Language Summary: Acute Myeloid Leukemia (AML) is an aggressive blood cancer. It occurs when immature cells build up in the bone marrow, the soft tissue inside your bones where the body makes new blood. While many people respond well to initial treatment, the disease often returns because some AML cells survive by “hijacking” their surroundings.
This review explains how AML cells attach themselves to healthy bone marrow structures and send out chemical signals that force nearby healthy cells to protect them. This creates a shield that hides the cancer from both chemotherapy and the body’s own immune system. Importantly, the review explores how we can target this communication to prevent the disease from returning.
A major challenge remains the difficulty of accurately modeling this complex environment in the laboratory. Current models often struggle to mimic the complex human bone marrow, which is why many drugs that appear promising in tests fail to help people in clinical trials. Therefore, the review highlights the need to use advanced models which allow researchers to more reliably test new strategies to disrupt the protective bone marrow environment.
The review concludes that the bone marrow acts as a single, connected shield rather than separate pieces. Because these parts work together to protect the cancer, blocking just one pathway is often not enough. Overcoming resistance requires new strategies that simultaneously target the leukemia cells and the multiple parts of the environment that support them.

Keywords: acute myeloid leukemia, bone marrow microenvironment, therapeutic resistance, targeted therapy

Introduction

Acute myeloid leukemia (AML) is an aggressive hematological malignancy characterized by the clonal expansion of myeloid progenitor cells with a blockade in differentiation.1 This process is driven by leukemic stem cells (LSCs), a self-renewing subpopulation at the apex of the leukemic hierarchy that sustains the disease and often resists conventional therapy.2 The resulting accumulation of immature blasts in the bone marrow (BM) disrupts normal hematopoiesis, giving rise to anemia, thrombocytopenia, and increased susceptibility to infections.3

Epidemiology, Genetics and Current Treatments

AML is the most common acute leukemia in adults, with an incidence of approximately 4.4 per 100,000 individuals in the United Kingdom (UK).4 Although AML mostly affects older people, with a median diagnosis age of 72 years, it can also occur in children (pediatric AML), which generally has a much improved prognosis.4,5 However, even with induction therapy achieving complete remission in most patients (60–80% in younger adults and 45–60% in older adults), long-term outcomes remain poor, with only 16.5% surviving beyond five years in the UK, largely due to relapse and the emergence of therapy resistance.4,6

AML is a genetically heterogeneous disease, with recurrent mutations in NPM1, FLT3, DNMT3A, IDH1/2, RUNX1 and TP53.7,8 It is further characterized by translocation events that generate fusion oncogenes, most notably t(15;17) [PML-RARA], t(8;21) [RUNX1-RUNX1T1], inv(16) [CBFB-MYH11], inv(3) [GATA2-MECOM], t(6;9) [DEK-NUP214] and KMT2A rearrangements. This molecular diversity has major clinical implications for prognosis and therapy selection.9 Despite significant advances in molecular profiling and the introduction of targeted therapies, intensive induction therapy with cytarabine plus an anthracycline (“7+3”), followed by consolidation with further chemotherapy or hematopoietic stem cell transplantation (HSCT), has remained the mainstay for decades.9–11

More recently, there has been a shift towards targeted therapies that exploit specific genetic vulnerabilities. Several classes of drugs have demonstrated significant clinical efficacy, particularly when combined with hypomethylating agents or chemotherapy: FLT3 inhibitors (midostaurin,12,13 gilteritinib14); IDH1/2 inhibitors (ivosidenib,15,16 enasidenib17–19); and the B-cell lymphoma 2 (BCL-2) inhibitor venetoclax.20–26 Outcomes have also been improved in some patients through the incorporation of targeted agents into intensive chemotherapy, as seen with gemtuzumab ozogamicin (GO) in CD33-positive disease.27

However, resistance mechanisms and relapse continue to challenge durable responses.28 As a result of the significant challenges that persist, despite genetic stratification, attention is turning to the bone marrow microenvironment (BMME) as a contributor to therapeutic failure.29–32 AML blasts exploit the BMME to evade immune surveillance, gain a metabolic advantage, resist chemotherapy, and establish reservoirs of residual disease. However, despite significant promise in preclinical settings, niche-targeting strategies have yet to deliver a consistent clinical benefit (Table 1).

Table 1 Clinical Trials Targeting Crosstalk Between Acute Myeloid Leukemia (AML) Cells and the Bone Marrow Microenvironment. This Table Summarizes Key Clinical Trials Investigating Therapeutic Strategies Designed to Disrupt the Protective Interactions Between AML Blasts and the Bone Marrow Microenvironment. The Trials are Categorized by the Specific Biological Signaling Axis or Niche Component Being Targeted, Including Adhesion Molecules, Chemokine-Mediated Retention, Intracellular Signaling Pathways, Metabolism, and Immune Checkpoints. Clinical Trial Identifiers (NCT Numbers) and Status Information Were Verified via ClinicalTrials.gov or the EU clinical trials register and are Accurate as of 1 April 2026.

Scope of This Review

In this review, we discuss how AML cells interact with and reshape the BMME, highlighting that these interactions serve as essential mechanisms for leukemic survival while simultaneously offering opportunities for new targeted therapies. We also evaluate the current barriers to clinical translation of therapies targeting interactions between AML cells and the BMME, specifically addressing the inherent complexity and redundancy of the BMME and the technical limitations of existing model systems.

Bone Marrow Microenvironment

The BM is a complex and dynamic tissue responsible for maintaining lifelong hematopoiesis through a delicate balance between hematopoietic stem cell (HSC) self-renewal, proliferation, and differentiation.86–88 This process is tightly regulated by the BMME, which provides physical scaffolding, cellular interactions, and molecular signals essential for HSC maintenance and lineage commitment. In AML, this initially healthy, HSC-supportive niche is hijacked and remodeled to create a distinctly pathogenic BMME to favor disease progression and treatment resistance, a transition that can begin with early pre-leukemic mutations that facilitate clonal expansion and leukemogenesis.89,90 This pre-leukemic remodeling creates a dysfunctional environment that facilitates the clonal expansion of mutated cells over healthy progenitors.91 By providing a selective advantage to these early clones, the remodeled niche actively contributes to the clonal evolution and eventual leukemogenic transformation of the disease.92–96 Therefore, understanding the physiological role of individual components and interactions within the BMME, and how they are manipulated in AML, can shed light on how we may re-sensitize leukemic cells to treatment.32

Healthy Niche

Two major anatomical niches are recognized within the BM: the endosteal and the vascular niches, although increasing evidence supports significant functional overlap between these compartments.97 The endosteal niche, rich in osteoblasts, supports HSC quiescence and self-renewal partly via stromal Wnt/β-catenin and Notch signaling.90,98–101 In contrast, the vascular niche, situated near sinusoids and arterioles, is formed predominantly by endothelial cells that secrete growth factors including stem cell factor (SCF), C-X-C motif chemokine 12 (CXCL12; also known as stromal cell-derived factor 1 or SDF-1), and Transforming Growth Factor Beta 2 (TGF-β2) to promote HSC activation, proliferation, and differentiation.90,98,99 Genetic lineage-tracing studies have shown that SCF derived specifically from arterial endothelial cells is essential in HSC maintenance.98,99

Within these niches, mesenchymal stromal cells (MSCs) form a central component of the stromal compartment and are multipotent progenitors capable of differentiating into osteoblasts, adipocytes, and chondrocytes, thereby contributing to the structural and functional organization of the BM niche.102,103 The majority of MSCs are situated within the perivascular space of the BMME, in close association with blood vessels, and are characterized by the expression of leptin receptor (Lepr), Nestin (Nes), or NG2 (Cspg4), which distinguish overlapping subsets with distinct HSC-supportive roles.86,99,102,104,105 CXCL12-abundant reticular (CAR) cells are an MSC subset, which largely correspond to Lepr+ perivascular MSCs. CARs form extensive structural and functional scaffolds that coordinate HSC localization, anchor them in place and mediate their quiescence.106

Fibroblasts are a mesenchymal population within the BM that is distinct from MSCs and contribute to the composition of a healthy BMME network.90,107 Although distinguishing fibroblasts from BM-MSCs remains challenging due to the absence of definitive surface markers, transcriptomic analysis has identified multiple subsets, including subsets expressing CXCL12 and ANGPT1, indicating a potential for direct regulation of the BMME.90

In addition to the key regulatory cell types mentioned above, there is an emerging picture of less well studied BMME components that may have significant functional roles in normal BMME composition and signaling. Adipocytes, once considered inert space fillers, are now recognized as active contributors to hematopoietic support through the production of factors such as SCF.108,109 Non-myelinating Schwann cells help preserve HSC dormancy by regulating sympathetic innervation and TGF-β activation.110 Megakaryocytes have also been implicated in regulating HSC proliferation; for example by releasing thrombopoietin (TPO) which can stimulate platelet production as well as supporting HSC growth.111

The immune compartment forms another integral part of the BMME, establishing a complex interplay between immune effectors and this specialized niche. Neutrophils, macrophages, T cells, and natural killer (NK) cells are distinct populations that mediate HSC fate by regulating processes such as retention, differentiation, and quiescence.112

These diverse cellular populations are surrounded by highly specialized extracellular matrix (ECM) that provides both structural support and a delivery mechanism for instructive biochemical and biomechanical cues essential for HSC regulation.113,114 The ECM is composed of glycoproteins such as laminins, fibronectin, and osteopontin, together with various collagens and proteoglycans. Collectively, these components form an organized scaffold that anchors niche cells and shapes gradients of cytokines and growth factors within the BMME. Beyond biochemical signaling, the physical properties of the ECM, such as stiffness and topography, act as potent biophysical regulators of HSC fate through mechanotransduction pathways, influencing differentiation.115

AML Niche

This balance of physical and biochemical cues that is carefully maintained in health is disrupted in malignancy. In AML, the BMME is co-opted and remodeled into a malignant niche that promotes leukemic cell survival, proliferation, and therapy resistance while impairing normal hematopoiesis.91 Recent evidence indicates that these changes can occur early in disease evolution, with a “pre-leukemic” niche emerging before overt transformation. Profiling of the pre-leukemic BMME has revealed an altered state, characterized by a loss of endothelial cells and reduced collagen deposition by fibroblasts, suggesting that microenvironmental dysfunction may precede and facilitate malignant progression.89 Once established, AML cells further manipulate cellular adhesion pathways and soluble factors within the niche to reinforce protection from chemotherapy, thereby promoting resistance and relapse.30 Examples of the extensive interactions between AML and the BMME discussed in this review are summarized in Figure 1, highlighting the complexity of this protective niche. By co-opting native BMME signaling to drive retention, proliferation, and survival, AML blasts evade therapeutic intervention, underscoring the critical need to consider this remodeled niche when assessing novel targets.

AML diagram: MSCs, osteoblasts, adipocytes, endothelial cells boost survival, chemoresistance.

Figure 1 The bone marrow microenvironment as a therapeutic barrier and source of pro-survival crosstalk in acute myeloid leukemia (AML). AML blasts interact with niche-resident mesenchymal stromal cells (MSCs), osteoblasts, adipocytes and endothelial cells (arterial and sinusoidal) through adhesion and signaling axes including VCAM-1/VLA-4, CXCL12/CXCR4, E-selectin/CD44, JAG1/Notch. AML-derived factors such as MIF, ANG1/2 and GDF15 further engage receptors on BMME cells (CD74, TIE2 and TGF-βR), reinforcing reciprocal crosstalk between leukemic and stromal compartments. These interactions promote blast adhesion, retention within the niche, proliferation and resistance to chemotherapy. In parallel, the immune landscape is driven towards an immunosuppressive state; TGF-β released by AML cells impairs NK cell surveillance, while PD-L1/PD-1 checkpoint engagement and M2 macrophage polarization facilitate immune evasion. M2 macrophages abbreviated to M2 MΦ. Red arrows and text indicate the predominant functional outcomes of each interaction. Some parts of image adapted from Servier Medical Art (https://smart.servier.com/), licensed under CC BY 4.0 (https://creativecommons.org/licenses/by/4.0/).

Adhesion-Mediated Interactions and Resistance

AML blasts interact closely with stromal and endothelial cells through adhesion molecules that activate pro-survival signaling and promote resistance to chemotherapy. Integrins represent a prominent family of these receptors, consisting of heterodimeric transmembrane proteins composed of α and β subunits.116 While leukemic cells express various integrin combinations, the β1-integrin subfamily has been shown to be essential for anchoring blasts to the extracellular matrix and stromal cells. β1-integrin signaling through the Very Late Antigen-4 (VLA-4; α4β1 integrin)–Vascular Cell Adhesion Molecule 1 (VCAM-1) axis, has been shown to enhance AML blast survival. Specifically, the overexpression of VLA-4 on AML cells and VCAM-1 on stromal cells have been shown to trigger nuclear factor kappa-light-chain-enhancer of activated B cells (NF-κB)-dependent signaling that protects them from cytotoxic stress.117 Engagement of CD44 enhances VLA-4 activation and avidity on AML cells, strengthening adhesion to VCAM-1-expressing stromal cells and promoting resistance to chemotherapy.118 These leukemia-supporting mechanisms can provide novel therapeutic targets, as disrupting these interactions through blocking CD44, either alone or in combination with focal adhesion kinase (FAK) blockade, re-sensitizes AML cells to treatment in vitro.119

Although direct targeting of the VLA-4–VCAM-1 axis has not yet yielded an approved therapy for AML, the anti-VLA-4 monoclonal antibody natalizumab, approved for multiple sclerosis, demonstrates the pharmacological feasibility of this approach.120 Furthermore, integrin-targeted agents have entered clinical evaluation in other malignancies,121 while dual targeting of FAK and CD44 is yet to progress further than in vitro studies,119 FAK inhibition with defactinib is currently being investigated in combination with ASTX727 (decitabine/cedazuridine) in a phase I clinical trial (NCT05636514).

To secure residence within the vascular niche, AML cells exploit endothelial adhesion molecules, such as E-selectin. In the healthy BMME, E-selectin expressed on sinusoidal endothelium regulates HSC homing and quiescence.122–124 In AML, engagement of E-selectin on BM endothelium activates pro-survival signaling in leukemic blasts and contributes to chemotherapy resistance. Conversely, uproleselan (GMI-1271), a glycomimetic which binds to E-selectin preventing cancer cell binding, reduces blast adhesion, mobilizes them into circulation, and enhances treatment efficacy in vivo.125

In a Phase III clinical trial of patients with relapsed or refractory AML (NCT03616470), uproleselan showed an acceptable safety profile and signs of clinical activity, but the study did not achieve its primary overall-survival endpoint. Pre-specified subgroup analyses suggested potential benefit in refractory disease, with few treatment-related toxicities.33 An ongoing study (NCT03701308) is evaluating daunorubicin and cytarabine with or without uproleselan as induction therapy for patients aged ≥ 60 years.

Overall, although the biological rationale for disrupting adhesion is strong, the translation into clinical benefit has proven challenging (summarized in Table 1). The inability of single-agent adhesion inhibitors to consistently improve patient outcomes indicates that AML cells rely on a complex network of retention signals rather than a single physical anchor. This suggests that the protective capacity of the BMME is not solely dependent on direct cell-to-cell contact but is likely reinforced by soluble factors. To fully understand niche-mediated retention, one must also consider the role of chemokine gradients which, much like adhesion molecules, actively tether leukemic blasts to their protective microenvironment.

Chemokine-Mediated Retention

In the normal marrow, the CXCL12/CXCR4 axis directs HSC homing;126,127 however, AML cells co-opt this signal to anchor themselves within the protective niche and maintain quiescence.128,129 Interestingly, this provides a link between AML genetic heterogeneity and the BMME as frequently occurring mutations in AML, such as TET2 and FLT3-ITD, have been correlated to aberrant CXCL12/CXCR4 signaling, effectively locking LSCs within the niche.130,131

Plerixafor (AMD3100), a CXCR4 antagonist blocking the CXCL12 signal, originally used for stem cell mobilization in lymphoma and myeloma, has been tested in clinical trials for AML.132 While it successfully mobilizes AML cells out of the protective BM niche into the peripheral blood, where they are more susceptible to cytotoxic agents, translating this mobilization into improved long-term survival has been difficult (NCT01352650 and NCT00943943).34,35 Alternative agents such as dociparstat sodium (DSTAT or CX-01), which is derived from heparin and alters the activity of the CXCL12/CXCR4 axis, has shown encouraging responses when combined with azacitidine in a Phase I trial (NCT02995655),37 as well as promising complete remission (CR) and event-free survival (EFS) rates in a recent Phase II trial when added to induction therapy (NCT02873338).38 Similarly, motixafortide (BL-8040), another high-affinity CXCR4 inhibitor, has shown efficacy in combination with cytarabine in a Phase IIa clinical trial (NCT01838395).36

Several alternative methods of drug delivery to target this axis are also being considered in preclinical research. For example, M-E5-Dox integrates a chemically synthesized CXCR4 antagonistic peptide and the cytotoxic drug, doxorubicin, using DSPE-mPEG2000 micelles, allowing CXCR4 downregulation alongside targeted doxorubicin uptake.133 These strategies aim to improve efficacy by simultaneously disrupting the protective niche and delivering cytotoxic payloads.

In summary, although pharmacological CXCR4 inhibition can transiently mobilize AML cells and enhance short-term chemosensitivity, clinical outcomes indicate that mobilization alone is insufficient to overcome durable niche protection (Table 1). The microenvironment does not merely hold AML cells in place; it engages them in reciprocal signaling that actively promotes survival and drug resistance. Therefore, to fully overcome niche protection, internal signaling cascades sustained by these stromal interactions must also be addressed.

Beyond Adhesion and Retention: Targeting Niche-Derived Signaling

While adhesion molecules physically anchor AML cells within the marrow, their long-term survival and resistance to therapy depend on a complex network of intracellular signaling pathways. AML cells do not merely passively receive these signals; they actively engage in bidirectional crosstalk with stromal components to generate a self-sustaining, protective environment.90

JAK/STAT Signaling

In AML, Janus kinase/signal transducers and activators of transcription (JAK/STAT) signaling acts as a major conduit for stromal-derived inflammatory cues, reinforcing pro-survival and anti-apoptotic responses in leukemic cells that compromise therapeutic efficacy.134–138 The JAK/STAT pathway is a central regulator of hematopoiesis, immune response, and cell survival.139 While intrinsic activating mutations (such as JAK2 V617F) are only identified in a small subset of patients, the JAK/STAT pathway is frequently activated in AML via extrinsic signals from the BMME.134 For example, leukemic blasts stimulate MSCs to upregulate the secretion of interleukin-6 (IL-6) and metalloproteinase-14 (MMP14). This leads to activation of the JAK/STAT pathway in the blasts, driven directly by IL-6 and indirectly via the MMP14-dependent release of prostaglandin E2 (PGE2) from MSCs.135–137 The resulting phosphorylation of STAT3 and STAT5 drives the expression of pro-survival BCL-2 family proteins; this axis establishes a high apoptotic threshold that confers chemoresistance.138

Strategies to disrupt JAK/STAT signaling are under active clinical investigation (Table 1). Ruxolitinib, a selective inhibitor of the AKT site on both JAK1 and JAK2, has been explored as a monotherapy, and in combination with venetoclax and/or decitabine, but showed specific potential as a second-line therapy for differentiation syndrome in acute promyelocytic leukemia (APL) (NCT03874052, NCT01251965, NCT00674479, NCT02257138 and NCT04446806).39–43 Ruxolitinib is also being investigated for limiting relapse after allogeneic stem cell transplantation (NCT03286530),44 as well as in combination with CART123 cells for relapsed or refractory disease (NCT06768476). Agents targeting this pathway less directly showed some preliminary anti-leukemic activity, including OPB-111077, which disrupts mitochondrial oxidation and STAT3 phosphorylation, as well as pacritinib, a dual FLT3/JAK2 inhibitor, which was explored for patients with FLT3 mutations (NCT03197714, NCT03063944 and NCT02323607).45–47

Tocilizumab, a humanized monoclonal antibody targeting the IL-6 receptor (IL-6R), was recently evaluated in the phase I TOCILAM study. In this trial, the addition of tocilizumab to standard “7+3” induction chemotherapy was found to be safe, with no dose-limiting toxicities observed and encouraging complete remission (CR) rates (NCT04547062).48 IL-6 blockade with tocilizumab was also explored in the post-transplant setting in a phase II trial to mitigate IL-6-driven inflammation and reduce the risk of graft-versus-host disease (GVHD) following stem cell transplantation but it did not provide significant reduction in GVDH and/or survival benefit (NCT03434730).140 Collectively, the critical role of JAK/STAT signaling in mediating stromal protection, combined with emerging signs of clinical efficacy, validates the continued pursuit of pharmacological strategies targeting this pathway.

PI3K/AKT/mTOR Signaling

Activated by direct contact with stromal cells or soluble factors such as CXCL12, Phosphoinositide 3-kinase (PI3K), protein kinase B (AKT) and mechanistic target of rapamycin (mTOR) (PI3K/AKT/mTOR) signaling contributes to the therapeutic barrier maintained by the BMME, promoting AML survival and resistance.129,141 Evidence highlights a reciprocal interaction where AML blasts induce the downregulation of methyltransferase-like 3 (METTL3) in MSCs; this triggers AKT activation in the stroma and directs MSCs toward adipogenic differentiation, creating a lipid-rich niche that fuels cancer cell survival.142,143

Effective targeting of the pathway in a clinical setting has proven challenging (Table 1). First-generation PI3K inhibitors, such as idelalisib (CAL-101), which inhibits the PI3Kδ isoform, showed no meaningful response in AML, while the pan-PI3K inhibitor buparlisib (BKM120) demonstrated only modest efficacy with significant toxicity (NCT00710528 and NCT01396499).49,50 Similarly, dual targeting with inhibitors of both PI3K and mTOR (eg gedatolisib, dactolisib) have largely failed as single agents due to lack of therapeutic response and poor tolerance (NCT02438761 and NCT01756118).51,52

Complexes of mTOR, such as mTORC1, are activated within osteoblastic niches, acting via IL-6 to promote AML cell growth, providing rational for mTOR-directed therapies to target this interaction.144 The mTOR inhibitors rapamycin/sirolimus, temsirolimus and everolimus have shown limited single-agent activity, though some benefit has been observed in combination with chemotherapy (NCT00235560, NCT02109744, NCT01822015, 2007–005374-31 and NCT01074086).53–57 Similarly, direct AKT inhibitors (eg uprosertib, afuresertib) have also been largely ineffective (NCT01907815 and NCT00881946).58,59 However, novel strategies are emerging such as ONC201, an imipridone that antagonizes DRD2 and activates mitochondrial ClpP to downstream inactivate AKT and ERK, is currently being evaluated in combination with venetoclax (NCT02392572). It was found to be well tolerated and had encouraging early responses as maintenance therapy to prevent post-transplant relapse (NCT03932643).60 Together, these findings indicate that PI3K/AKT/mTOR signaling in AML reflects a microenvironmentally reinforced survival state, driven by convergent niche-derived signals rather than a discrete oncogenic dependency, helping to explain the limited clinical efficacy of direct pathway inhibition and underscoring the need for combinatorial or context-dependent therapeutic strategies.

Angiopoietin/Tie2 Signaling

Angiopoietin/Tie2 signaling serves as a vascular therapeutic barrier in AML within the BMME, stabilizing endothelial niches and reinforcing pro-survival cues, which drives disease progression and protects leukemic cells from cytotoxic and targeted therapies.145–147 Leukemic blasts have been shown to overexpress angiopoietin-1 (Ang-1), which engages Tie2 receptors on endothelial cells to subvert the vascular niche and promote cancer cell proliferation.145

Consequently, disruption of this signaling network has been explored as a therapeutic strategy (Table 1).145,148 In preclinical studies, the dual Tie2/p38 MAPK inhibitor pexmetinib (ARRY-614) demonstrated the ability to abolish AML cell proliferation.149 However, whilst this agent has been well tolerated and has shown efficacy in myelodysplastic syndromes (MDS), it has not yet progressed to the clinical setting for AML (NCT00916227).150 Conversely, other inhibitors of this pathway have entered clinical evaluation but yielded modest results. For instance, trebananib, a peptibody that neutralizes Ang-1 and Ang-2, and the switch-control tyrosine kinase inhibitor, that specifically targets Tie2, as well as VEGFR-2 and BCR-ABL, have both been tested in clinical trials for AML, but demonstrated limited efficacy as monotherapies or in combination with chemotherapy (NCT01555268 and NCT00827138).61,62 Collectively, these findings suggest that Angiopoietin/Tie2 signaling functions primarily to stabilize a permissive vascular niche rather than acting as a leukemia-specific driver, helping to explain the limited clinical efficacy of Tie2-targeted monotherapies in AML.

Wnt/β-Catenin Signaling

Wnt/β-catenin signaling represents a niche-remodeling component of the BMME as a therapeutic barrier in AML, promoting osteogenic skewing and stromal states that indirectly reinforce leukemic cell survival and chemoresistance.151 Osteoblasts derived from patients with AML exhibit elevated levels of β-catenin activation, a feature clinically correlated with poor prognosis and reduced treatment response.152 Mechanistically, the interaction between AML blasts and MSCs leads to the release of the pro-inflammatory mediator PGE2 from MSCs, which subsequently drives β-catenin expression.153

Therapeutic targeting of this pathway has proved challenging (Table 1). Direct inhibition strategies have failed to demonstrate efficacy in clinical trials (eg NCT01606579 and NCT01398462)63 and alternative approaches aimed at stabilizing β-catenin through inhibition of Glycogen Synthase Kinase-3 (GSK-3) with inhibitors such as LY2090314, have likewise been explored with limited efficacy in patients with AML (NCT01214603).64,154,155 Targeting upstream regulators has also been explored, but the inhibition of the cyclooxygenase-1/2 (COX1/2) axis with the non-steroidal anti-inflammatory drugs sulindac and celecoxib did not translate clinically, with trials ultimately abandoned due to lack of funding and low accrual (NCT01843179 and NCT03878524).156,157 Despite promising preclinical data, this consistent lack of translational success highlights that Wnt signaling within the leukemic niche operates predominantly through microenvironmental remodeling rather than direct leukemic cell dependency, underscoring why tumor-intrinsic pathway inhibition has failed to overcome this component of the therapeutic barrier.158–160

Notch Signaling

Notch signaling acts as another niche-remodeling element creating a therapeutic barrier, where AML cells activate this pathway within MSCs to drive aberrant osteogenic differentiation, which results in the accumulation of osteoprogenitors and pre-osteoblasts.161 This remodeled niche not only enhances leukemic cell growth and therapy resistance, but also compromises the support of normal HSCs.161 Consistent with this, BM-MSCs derived from patients with AML exhibit upregulated Notch1 and its ligand Jagged1 (JAG1), as well as increased expression of the downstream target gene HES1. Together, these findings confirm active Notch signaling within components of the AML BMME. Concurrently, activation of Notch1 within the AML blasts themselves further supports leukemic proliferation and chemoresistance.162,163

Therapeutic strategies targeting this axis have shown promise in preclinical models. In particular, synergistic apoptosis induction has been observed when FLT3 tyrosine kinase inhibitors (TKIs) are combined with γ-secretase inhibitors (GSIs), such as DAPT and RO4929097, which block Notch activation.164 However, clinical translation has been limited (Table 1); only GSI MK-0752 has been tested in AML patients, where it yielded poor response rates (NCT00100152).65 These limitations have promoted interest in alternative approaches to targeting notch ligand-specific interactions. For instance, JAG1 inhibition has been shown in vitro to restore healthy hematopoiesis and ameliorate anemia, thrombocytopenia, and immune dysregulation driven by the β-catenin/JAG1/Notch1 axis in AML osteoblasts.165 Similarly, inhibitors of JAG1 and JAG2, such as CTX014, show preclinical promise; they have been shown to sensitize tumors to T-cell-mediated killing.166 In summary, the Notch pathway represents an attractive therapeutic target for disrupting the leukemic niche, yet further clinical evaluation is required to translate this into therapeutic benefit.

NF-κB Signaling

The NF-κB pathway is a critical mediator of inflammation and cell survival, that is frequently hijacked through stromal interactions within the leukemic niche.117,167,168 Constitutive activation of NF-κB in AML cells drives the expression of anti-apoptotic proteins, including BCL-2 and B-cell lymphoma-extra large (BCL-XL), thereby promoting cell survival and resistance to cytotoxic stress.169 Due to the on-target toxicities associated with NF-κB-directed treatment, focusing on downstream mediators is a more attractive option.170 The NF-κB-driven increase in anti-apoptotic proteins has been successfully exploited clinically, through the BCL-2 inhibitor, venetoclax, in combination with the hypomethylating agent azacitidine; a regimen that has established a new standard of care for patients who are ineligible for intensive chemotherapy (NCT02993523).26

Beyond direct BCL-2 inhibition, strategies targeting upstream regulators of NF-κB have also been explored (Table 1). For example, stabilization of the NF-κB inhibitor, IκBα, using the proteasome inhibitor MG-132, either alone or in combination with idarubicin, effectively promoted leukemic cell death in preclinical models; however, this specific approach has not yet translated to clinical practice due to low bioavailability, specificity and stability of the drug.171–173 An alternative proteosome inhibitor bortezomib, which inhibits the degradation of IκBα, reducing NF-kB activity has been evaluated in several AML trials with mixed results in older populations.173 While its combination with decitabine did not enhance outcomes (NCT01420926),66 adding it to daunorubicin and cytarabine (NCT00742625) successfully improved remission rates.67 Currently, bortezomib is being assessed in newly diagnosed patients: a Phase III trial is investigating its combination with sorafenib tosylate (NCT01371981), and a Phase I/II study (NCT07008638) is evaluating it with CPX-351 for patients harboring TP53 mutations.68 In summary, the notable success of venetoclax, alongside encouraging findings of manipulating the upstream members of the NF-kB, as well as its critical role in AML pathogenesis, highlights this pathway as a compelling target for further clinical investigation.

TGF-β

Transforming growth factor-beta (TGF-β) plays a multifaceted role in the leukemic niche, contributing to chemoresistance while actively remodeling microenvironmental components, including endothelial and Natural Killer (NK) cells.174–176 Notably, the activity of TGF-β is significantly elevated in the BM of patients with relapsed AML, impairing NK cell function and compromising innate tumor surveillance.174 Niche remodeling extends further to BM adipocytes. AML cells secrete growth differentiation factor 15 (GDF15), which signals through the GDF15/TGFBRII/FOXC1/TRPV4 axis to alter adipocyte metabolism by reducing Ca2+ influx, and ultimately enhance leukemic cell survival.177,178

Pharmacological targeting of the TGF-β pathway has shown promise in related myeloid malignancies. For example, the TGF-β1 receptor inhibitor, galunisertib, has demonstrated clinical efficacy for MDS (NCT02008318);179 however, application in AML remains to be established. TGF-β receptor targeting molecules have also been explored as a way of disrupting adipocyte-mediated survival support within the AML BMME, although results have been variable. For example, the TGF-β receptor I inhibitor LY-2109761 has shown mixed effects in preclinical AML models.178,180,181 Conversely, restoring downstream signaling through pharmacological activation of TRPV4 in BM adipocytes using the agonist 4aPDD has yielded promising preclinical results,178 suggesting that targeting downstream effectors of the TGF-β axis may represent a more tractable therapeutic strategy.

IL-8

Interleukin-8 (IL-8) expression within the leukemic niche is driven by complex bidirectional crosstalk between AML blasts and stromal cells.182,183 AML-derived migration inhibitory factor (MIF) activates CD74 and downstream PKCβ signaling in MSCs, triggering IL-8 overexpression. This promotes MSC migration towards AML cells, releasing CXCL12 and facilitating leukemic cell survival.184 This inflammatory state is further reinforced by osteoblast-derived signals and the hypoxic conditions characteristic of the BMME.182,185 Pre-clinical pharmacological disruption of this axis, either through PKCβ inhibition (using agents such as Ro-31-8220, Go6976, or enzastaurin) or direct blockade of CD74 and IL-8, has been shown in vitro to abolish this stromal-mediated protection.184

Clinically, activation of the IL-8/CXCR2 pathway correlates with adverse outcomes in AML. Preclinical investigation of SB332235, which binds to and blocks CXCR2 activation, shows that it can suppress AML cell proliferation and induces cell cycle arrest.186 Although several CXCR1/CXCR2 inhibitors, including reparixin and SCH-527123, as well as IL-8-neutralising antibodies, have been evaluated in other disease settings,187–189 their therapeutic efficacy in AML has not yet been tested clinically.

VEGF

Vascular Endothelial Growth Factor (VEGF), a signaling protein involved in angiogenesis, is markedly upregulated in endothelial cells following exposure to the cytotoxic drug, cytarabine.190 In co-culture AML blasts develop resistance to cytarabine, which can be partly resensitized through targeting the VEGF receptor.190 Despite the rationale that this endothelial support limits treatment efficacy for AML blasts, clinical trials evaluating VEGF receptor inhibitors (such as axitinib and cediranib), or direct VEGF sequestration with bevacizumab, have provided limited benefit (Table 1), regardless of whether they were administered concurrently with or following chemotherapy (NCT00071006, NCT00475150, NTR904 and NCT00015951).69–72,191

Although multi-targeted tyrosine kinase inhibitors, including sunitinib and sorafenib, possess anti-VEGF activity, their clinical and pre-clinical utility in AML has been largely restricted to FLT3-mutant disease rather than inhibition of angiogenic signaling (NCT00783653, NCT01254890 and NCT02728050).192–194 Similarly, aflibercept, a decoy VEGF receptor that prevents ligand binding, demonstrated potent anti-leukemic synergy with chemotherapy in preclinical models but failed to successfully translate into the clinical setting.195 This may suggest that VEGF is a bystander rather than offering a causative change in therapy resistance.

Metabolic Crosstalk Within the Leukemic Niche

As indicated above, the bidirectional relationship between AML cells and the BMME extends beyond structural and signaling support to include a complex metabolic interplay. AML cells actively remodel the niche to promote their own metabolic reprogramming, thereby supporting survival, proliferation, and resistance to therapy.196 These metabolic interactions are currently being exploited through various niche-targeted therapeutic interventions undergoing evaluation in both preclinical studies and clinical trials (Table 1).

Although the BMME maintains high vascular density, it remains inherently hypoxic.197 This condition is further exacerbated in AML through increased vascular leakiness.198 This low oxygen state is not merely a byproduct of the disease but a functional advantage, as it actively promotes AML cell survival and proliferation. Attempts to exploit this environment have led to the development of TH-302 (evofosfamide), a hypoxia-activated prodrug.199 TH-302 induces DNA damage upon metabolism in low-oxygen conditions and showed promise in preclinical models, but this success failed to translate into clinical efficacy (NCT01149915).73,199

The environmental constraints of the BMME, coupled with the differentiation status of the cells, dictate the specific metabolic dependencies of AML cells. While rapidly dividing blasts tend to rely on glycolysis, primitive LSCs are more dependent on mitochondrial oxidative phosphorylation (OXPHOS) for survival.200–203 Indeed, co-culture of AML cells with BM-MSCs induced metabolic shift toward glycolysis in AML cells, via CXCL12/CXCR4/mTOR signaling, inducing protection against cytarabine.204 Targeting this pathway with plerixafor or directly inhibiting glycolysis using 2-Deoxy-D-glucose (2-DG) and diclofenac increased chemosensitivity.

Similar challenges have emerged when targeting AML cells dependent on mitochondrial OXPHOS. Utilising inhibitors such as IACS-010759 (a BH3 mimetic) and CPI-613 (devimistat, a non-redox active analog of the OXPHOS cofactor lipoic acid) has yielded disappointing results in humans.75,205 A phase I clinical trial for IACS-010759 was terminated due to ineffectiveness and adverse effects (NCT02882321).74 While CPI-613 failed to demonstrate additional benefit (NCT03504410).75 Crucially, there is evidence that interactions between AML cells and MSCs within the BM can actively enhance OXPHOS, further driving chemoresistance.206

This metabolic flexibility is fuelled by a bidirectional exchange of metabolites between the BM stroma and AML cells, which may be an additional source of therapeutic targets. For instance, AML cells induce MSCs to secrete acetate which they take up via gap junctions to fuel the tricarboxylic acid cycle (TCA) cycle and lipid biosynthesis.207 Similarly, AML blasts trigger metabolic reprogramming in adipocytes to activate lipolysis.208,209 This generates fatty acids that are utilised by leukemic cells via fatty acid-oxidation (FAO) to produce the energy required for proliferation. While a detailed review of BMME adipocyte-driven FAO is beyond the current scope, its role as a therapeutic target has been documented extensively elsewhere.210

In addition to the exchange of metabolites, there is also active exchange of mitochondria from MSCs through tunnelling nanotubes to AML cells, increasing proliferation and resistance to therapy.211,212 AML cells are also able to increase mitochondrial biogenesis within MSCs.213 The anti-CD38 monoclonal antibody daratumumab has been shown to inhibit this mitochondrial transfer; however, it has demonstrated limited efficacy as a monotherapy in a clinical trial (NCT03067571).214 Further trials combining daratumumab with chemotherapy are currently recruiting (NCT06287944 and NCT05749276). Evidence further suggests that mitochondrial transfer is not limited to MSCs, as it also occurs between AML blasts and other BM resident cells, including endothelial cells and macrophages.215,216

Immune Evasion in the BMME

Within the BM, AML blasts actively drive immune niche remodeling to shield themselves from immune surveillance, thereby contributing a critical immunological component to the therapeutic barrier. This protection is orchestrated through the coordinated activity of stromal cells and immune-modulatory pathways that suppress anti-leukemic immune responses and promote disease persistence, representing potential targets for personalized therapy.217

Immune Checkpoint Inhibition

AML cells and LSCs exploit immune checkpoint pathways, such as PD-1/PD-L1, CTLA-4 and TIM-3 to evade immune detection, primarily through suppression of B and T cell activity.217 Beyond immune suppression, recent evidence suggests that PD-L1 also exerts intrinsic effects within AML cells, regulating cell cycle progression, proliferation, and apoptosis via downstream signaling pathways including PI3K/AKT.218

Therapeutic targeting of the PD-1/PD-L1 axis, using monoclonal antibodies such as pembrolizumab, nivolumab, and atezolizumab, is well-established in solid tumors and is now being actively evaluated in AML (Table 1). Early clinical studies have demonstrated potential benefits, including reductions in graft-versus-host disease (GVHD) following allogenic transplantation and improved responses in relapsed/refractory disease settings (NCT02768792, NCT02771197 and NCT04541277).76–78,80,81 A phase II trial is currently investigating the addition of pembrolizumab to standard induction chemotherapy (cytarabine plus idarubicin or daunorubicin) (NCT04214249).79

Alternative immune checkpoint targets are also being explored (Table 1). Ipilimumab, a CTLA-4 blocking antibody, was investigated in a successful phase I trial in combination with nivolumab219 and is currently being assessed in combination with decitabine for relapsed/refractory AML (NCT02890329).82 However, not all checkpoint-directed strategies have shown the same promise. For instance, while sabatolimab (a TIM-3 receptor inhibitor) demonstrated acceptable safety and tolerability in combination with venetoclax and azacitidine, its phase II trial (NCT04150029) was terminated following the failure of other TIM-3 inhibitor trials to meet their primary endpoints.83,84,217

Blockade of growth differentiation factor 15 (GDF-15) has been shown to synergize with PD-1 inhibition in solid tumors (NCT04725474).220 Similarly, antibodies targeting T cell immunoreceptor with Ig and ITIM domains (TIGIT), an inhibitory immune checkpoint receptor expressed on T cells and NK cells that suppresses cytotoxic function through engagement of ligands such as CD155, have demonstrated clinical benefit in combination with atezolizumab in non-small cell lung cancer (NCT03563716)221 However, evaluation in the context of AML remains at an early stage. Looking forward, emerging targets such as these, from solid tumor oncology, may hold relevance for AML.

BMME Shaping Response to Cellular Immunotherapies

The efficacy of cellular immunotherapies in AML, such as Chimeric Antigen Receptor (CAR) T-cells, is frequently constrained by the immunosuppressive BMME, which limits effector cell persistence, function and target engagement. To overcome this barrier, novel “dual-targeting” CAR-T cells strategies have been developed that simultaneously target AML blasts and immunosuppressive niche components. Examples include CAR constructs directed against CD123 and NKG2D ligands, designed to not only eliminate leukemic cells but also monocyte-like myeloid-derived suppressor cells (M-MDSCs) and alternatively activated (M2) macrophages that contribute to immune evasion.222

Despite these advances, CAR-T cell therapy in relapsed/refractory AML has historically been associated with limited efficacy and significant off-target toxicity, reflecting the lack of tumor-specific antigens and persistent microenvironmental immunosuppression.223 CAR-engineered natural killer (CAR-NK) cells offer a potential alternative, by retaining anti-leukemic activity while exhibiting a more favorable toxicity profile. Notably, CD33-targeted CAR-NK cells, adapted from CAR-T constructs, have recently demonstrated preliminary efficacy and safety in a phase I clinical trial (NCT05008575).85

Challenges in Modeling the BMME and AML Interactions

The intricate and dynamic crosstalk between AML blasts and the protective BMME represents a significant barrier to the successful translation of targeted therapies. While the biological rationale for disrupting microenvironmental support is compelling, faithfully reproducing these complex interactions in preclinical models remains a formidable challenge, which contributes to the gap between experimental promise and clinical efficacy. The various experimental platforms used to study these interactions, ranging from simplified cell cultures to advanced humanized systems, are summarized in Figure 2.

Diagram of in vitro and in vivo preclinical AML models with key features.

Figure 2 Methodological landscape of preclinical AML models. Left: In vitro platforms ranging from 2D monocultures and co-cultures (with mesenchymal stromal cells (MSCs) or fibroblasts) to 3D systems. While 2D models offer high reproducibility, 3D platforms (spheroids, organoids, scaffolds, and microfluidic chips) are utilized to better recapitulate the structural complexity, extracellular matrix (ECM) organization, and biomechanical cues of the bone marrow microenvironment (BMME). Right: In vivo murine models for translational validation. Patient-derived xenograft (PDX) models utilize immunocompromised mice to facilitate engraftment, though murine-specific stroma can distort human niche-mediated resistance. Humanized models involve the engraftment of human CD34+ hematopoietic stem cells (HSCs) to generate a human-specific immune compartment (T, B, and NK cells), facilitating more accurate clinical translation of novel therapeutics. Some parts of image adapted from Servier Medical Art (https://smart.servier.com/), licensed under CC BY 4.0 (https://creativecommons.org/licenses/by/4.0/).

Standard preclinical studies historically relied on immortalized AML cell lines cultured in suspension. Although these models facilitate the high-throughput interrogation of defined AML subtypes based on morphology, genetic mutations, and immunophenotypes, they fail to capture the cellular heterogeneity, spatial organization, and context dependence observed in patient disease.224,225 Two-dimensional (2D) co-culture systems incorporating stromal components (such as MSCs or endothelial cells) have therefore been developed to model niche-mediated protection more accurately.226 However, even these adaptations remain limited by the absence of native three-dimensional (3D) architecture and bio-mechanical cues that are integral to the BMME.

To better recapitulate this structural complexity, a range of 3D culture models have been introduced. While these systems offer important conceptual advances, their widespread adoption has been limited by significant technical barriers; they often require labor-intensive preparation, specialized biomaterials, and lengthy optimization periods. As a result, reproducibility across laboratories remains limited, reflected in the relative paucity of follow-up studies utilizing these specific models once initially described.227–232

In vivo murine models remain the gold standard for investigating leukemogenesis within a largely intact physiological niche.226 Nevertheless, fundamental species-specific differences impose important limitations. The reliance on immunocompromised hosts to permit human AML engraftment, together with the presence of a murine-specific stromal compartment, results in the absence or distortion of key immunological, cytokine and cell-cell interactions. These discrepancies likely contribute to the high attrition rate of therapies that show promise in murine models but fail to translate into meaningful clinical benefit.34,233,234

To address these challenges, increasing efforts are focused on the development of more representative, “humanized” preclinical models. Approaches such as mice engrafted with functional human immune systems, aim to restore aspects of the immune context lacking in conventional xenografts.235 Ultimately, progress in this area will depend on the generation of experimental platforms that more accurately reflect both the intrinsic heterogeneity of AML, and the multifaceted, adaptive nature of the human BMME thereby enabling more reliable evaluation of niche-targeted strategies.

Conclusion

AML is sustained not only by intrinsic genetic lesions but also by a highly dynamic and adaptable BMME that actively promotes leukemic cell survival, immune evasion, and therapeutic resistance. As outlined in this review, AML blasts engage in extensive bidirectional crosstalk with stromal, vascular, and immune compartments through a complex network of adhesion-dependent interactions, soluble factors, and reciprocal signaling pathways, collectively establishing a permissive niche that undermines the efficacy of otherwise rational targeted therapies.

Despite substantial advances in delineating these mechanisms, clinical translation of strategies aimed at disrupting niche-mediated support has remained limited (Table 1). This reflects both inherent redundancy and plasticity of microenvironmental support networks and the ongoing difficulty of modeling their complexity in preclinical systems. Together, these observations indicate that the BMME functions as an integrated therapeutic barrier rather than a collection of independent, targetable pathways. Consequently, effective disruption of niche-mediated protection is unlikely to be achieved through single-pathway inhibition alone. Future therapeutic strategies will instead need to employ rational, context-aware combination strategies that simultaneously target leukemic cells and key components of their supportive microenvironment, informed by disease stage, molecular subtype and treatment timing. Such strategies represent a critical step toward eliminating the reservoirs of residual disease that drive clinical relapse, thereby improving long-term survival and cure rates for patients with AML.

Disclosure

The authors report no conflicts of interest in this work.

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