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Effect of Lactic Acid Bacteria-Fermented Soy Milk Extract (LEX) on Urinary 3-Indoxyl Sulfate in Japanese Healthy Adult Women: An Open-Label Pilot Study

Authors Fukuchi M, Yasutake T, Matsumoto M, Mizuno R, Fujita K, Sasuga Y

Received 9 September 2020

Accepted for publication 3 December 2020

Published 23 December 2020 Volume 2020:12 Pages 301—309


Checked for plagiarism Yes

Review by Single anonymous peer review

Peer reviewer comments 2

Editor who approved publication: Dr Gary Johanning

Mina Fukuchi,1 Takanori Yasutake,2 Miho Matsumoto,2 Ryohei Mizuno,3 Koichiro Fujita,4 Yasuhiro Sasuga1

1Hachioji Center for Research & Development, B&S Corporation Co., Ltd., Hachoji-shi, Tokyo, Japan; 2Healthcare Systems Co., Ltd., Nagoya-shi, Aichi, Japan; 3B&S Corporation Co, Ltd., Tokyo, Japan; 4Tokyo Medical and Dental University, Tokyo, Japan

Correspondence: Yasuhiro Sasuga
Hachioji Center for Research and Development, B&S Corporation Co., Ltd., 1-31-1 Nanakuni, Hachioji-Shi, Tokyo 192-0919, Japan
Tel +81 42-638-8915
Fax +81 42-638-8916
Email [email protected]

Objective: For the general population, the intestinal microbiota and its environment, including its metabolites, are important not only for disease prevention but also for overall quality of life. A convenient method to monitor the intestinal environment is to measure levels of urinary 3-indoxyl sulfate (3-IS). This approach has been used for several years. This study aims to clarify the efficacy of a lactic acid bacteria (LAB) dietary supplement combined with multi-strain LAB-fermented soy milk (LEX) extract in healthy, adult women with high urinary 3-IS levels.
Materials and Methods: Japanese women aged 30– 50 years with high urinary 3-IS levels and a tendency toward constipation were enrolled in this study. Each of them received 10 mL of a LEX-containing dietary supplement daily for 4 weeks. The primary outcome was changes in urinary 3-IS levels, and the secondary ones included the amount of defecation and more subjective symptoms of their physical condition, such as the Constipation Assessment Scale (CAS).
Results: Thirty participants were enrolled, and all completed the study. Every participant showed a statistically significant improvement in their level of urinary 3-IS after ingesting the test article for 4 weeks. Any changes in urinary 3-IS also showed a high correlation to initial 3-IS levels. Moreover, CAS scores and other subjective symptoms improved after ingestion of the LEX-containing dietary supplement. The level of urinary 3-IS showed a modest degree of correlation with the score of overall physical condition, including CAS (Pearson’s r = 0.21; p < 0.05).
Conclusion: These findings suggest that orally ingested LEX improves urinary 3-IS levels as an index of the health of the intestinal environment and that monitoring urinary 3-IS levels is effective in assessing changes in the intestinal environment and overall physical condition.

Keywords: lactic acid bacteria, soybean, 3-indoxyl sulfate, intestinal environment, intestinal microbiota, postbiotics


The gut not only functions as the digestive organ for food and the absorption of nutrients but also helps maintain systemic immunity, supports regulation of the central nervous system, and aids in detoxification. Mounting evidence indicates that the functions of the gut are affected by its environment, which in turn is affected by factors such as diet and commensal bacteria. The gut environment’s health is also related to the development of several diseases, eg, allergies and inflammation. The use of next-generation sequencing techniques has greatly expanded our knowledge of the microbiota composition and its relationship to disease.1 Recently, there have been many debates on what exactly constitutes a healthy gut microbiota composition. Current evidence supports the idea that healthy individuals share a common core of gut microbial genes mainly belonging to the Firmicutes and Bacteroidetes phyla.2 On the other hand, there have been reports that show that a high variability in gut microbiota composition is common among healthy individuals. Thus, it has become clear that each individual carries a variable microbiome.3

Diet is the main factor that determines the population of human microbiota, as dietary components act as substrates for microbial metabolism, thus forming the microbiome composition and function.4 Microbiota composition has been linked to disease due to its ability to modulate specific metabolites and signaling pathways. For example, a gut microbiota-dependent metabolite called trimethylamine N-oxide (TMAO) has been reported to cause atherosclerosis and thrombosis.5 As TMAO demonstrates, it is increasingly clear that the microbiota and its metabolites are important cofactors of host physiology and pathophysiology.6–8

Changes in the intestinal environment, including its metabolites, are important not only for disease prevention but also for quality of life in the general population. Conditions such as bad skin, constipation, diarrhea, and poor overall health can be related to the intestinal environment. Using expensive analysis methods, such as next-generation sequencing and metabolome analysis, is unrealistic for such physical condition changes in normal life. An easy and cost-effective way to observe changes in the intestinal environment and bacteria is needed.

A little old study found that several urinary metabolites (eg, indole derivatives, phenols, and amines, which originate from amino acids) may represent the condition of the intestinal environment. 3-indoxyl sulfate (3-IS) is a metabolite of dietary L-tryptophan (Trp) and acts as a cardiotoxin and uremic toxin. The intestinal microbiota metabolizes Trp into indole, which is then absorbed by the intestine and then further converted into 3-IS by the liver.9 Urinary 3-IS has been used as a screening tool for microbiota dysbiosis, small intestinal bacterial overgrowth, constipation, malabsorption, and intestinal mucosal permeability.9–13 The level of 3-IS can therefore be used for simple observations of the intestinal environment, which is easily and inexpensively measured using the colorimetric method on a urine sample.

The health benefits of lactic acid bacteria (LAB)-based products have been recognized worldwide. LAB fermentation is known to facilitate the digestion of foods or increase the bioavailability of nutrients in foods. Various types of LAB (as probiotics) and LAB-fermented food products have been developed and present benefits to both humans and animals, such as an improvement of the nutritional value of food, increased ability to prevent infections, alleviation of lactose-intolerance symptoms, modulation of specific/nonspecific immune responses, control of serum cholesterol levels, and reduction of colonic disease risk.14,15 The soybean has long been used as fermentation material, particularly in East Asia, for products such as soy sauce, miso, natto, and tempeh. Several studies on the fermentation of soybeans (and soy milk) using LAB report on the physiological function of these products. However, most of these reports focus on the hepatic functions of LAB-fermented soy, such as the metabolism of lipids like cholesterol and triglycerides, because soybean is known to improve lipid metabolism.16–21

Another study demonstrated that the ingestion of LAB dietary supplements derived from the extract of multi-strain LAB-fermented soy milk (LEX) can prevent colon cancer and activate intestinal immunity.22,23 Preliminary studies have also shown how LEX effects human colon polyps, intestinal flora, and periodontal disease.24–26 The positive results are based on how the LEX supplement improves the intestinal environment and microbiota composition, although verification is required. “Postbiotics” is also a relatively new term in the “-biotics” field, after probiotics and prebiotics. Postbiotics are functional, bioactive compounds produced in the matrix during fermentation and may improve human health.27,28 LEX is also a postbiotic material that uses the soybean as a substrate. Studies on LEX could contribute to the expansion of the postbiotics field.

In this pilot study, we used urinary 3-IS levels to assess the intestinal environment of our subjects and to evaluate the effects of LEX on the intestinal environment and microbiota metabolism. Changes in urinary 3-IS before and after the ingestion of LEX were investigated in healthy women with high urinary 3-IS levels. In addition, abdominal symptoms and other daily physical condition changes were investigated.

Materials and Methods

Study Design and Participants

This study was an open-label study evaluating the effects of LEX on urinary 3-IS. Secondary endpoints were any changes in subjective symptoms related to defecation and overall physical condition. This study enrolled Japanese women aged 30–50 years who had a tendency to become constipated. Sixty applicants were screened and 30 participants with high urinary 3-IS levels were enrolled. Those who had chronic illnesses or were allergic to soybeans, a raw material of the test substance, were excluded. Informed consent was obtained from each subject and ethical approval was obtained from the Ethics Committee of Healthcare Systems Co., Ltd. (registration number: 2001, Tokyo, Japan). The study was conducted according to the Declaration of Helsinki and was registered at the University Hospital Medical Information Network (ID UMIN000039276).

Test Article

The test article was a commercially available LAB dietary supplement (brand name LACTISTM) that was derived from multi-strain LAB-fermented soy milk (LEX) extract, obtained from B&S Corporation Co., Ltd. (Tokyo, Japan). Sixteen strains of LAB (species Lactobacillus brevis, Lactobacillus casei, and Lactobacillus plantarum) were used for the fermentation of the soy milk, then the extract of the fermented material was used in the final product.


Participants were recruited on a dedicated website, and 60 constipated and test-matched individuals were selected using a preliminary questionnaire. Of these, 30 participants were enrolled based on their urinary 3-IS levels. The enrolled participants were provided with the test article, a diary, questionnaires, and a urine collection kit and were instructed to ingest the test article once daily for 4 weeks.

The primary outcome was to measure levels of urinary 3-IS. These levels were measured three times in total, before the start of the experiment, and 2 and 4 weeks after starting intake of the test article using a quantitative indican assay kit (BioAssay Systems, CA, USA). This is an improved version of the Curzon and Walsh method with a colorimetric assay, corrected by creatinine (Cr) concentration, using mid-morning urine. To quantify the Cr in urine, an automatic analyzer (Accute RX, Canon Medical Systems, Tochigi, Japan) and a Cr assay kit (CicaLiquid-N CRE, Kanto Kagaku, Tokyo, Japan) were used.

To track secondary outcomes, a daily diary and three questionnaire surveys were completed at the time of urine collection. In the diary, daily defecation status and test article intake records were self-evaluated, together with stool volume (egg scale) and shape (six levels), stool odor (five levels), and the feeling of refreshment during defecation (three levels). The questionnaire comprised 21 items, 8 of which included the Japanese version of the Constipation Assessment Scale.29,30 Other questions were about skin condition, sleep quality, refreshment upon awakening, mood, appetite, and body condition, which were rated on a scale of five levels.

Statistical Analysis

A statistical analysis was performed to compare the evaluation items and determine their significance before and after intake of the test article. The paired t-test and the Wilcoxon signed-rank test were conducted on normally and non-normally distributed data, respectively. In the case of any sequential data with multiple steps, the Wilcoxon signed-rank test was conducted for the corresponding data. Bonferroni correction coefficient was used for multiple comparisons. The relationship between each data point was assessed using Pearson’s correlation and Spearman’s rank correlation coefficients with graphical inspection. Significant differences are indicated in the figures as *p < 0.05, **p < 0.01, and ***p < 0.001.


Study Participants

Figure 1 shows a flowchart of the study participants. This study was aimed at Japanese adult women aged 30–50 years with a tendency to feel constipated. A total of 642 individuals applied, of which 60 participants who met the participation criteria underwent urinary 3-IS screening. The 30 applicants with the highest urinary 3-IS levels were selected for the study. The intake rate of the test article was 100% according to self-reporting; there were no omissions in the daily diary, questionnaires, or urine samples. Table 1 shows the background of the study participants. The subjects were women with an average age of 44.9 ± 2.8 years, and the frequency of self-reported defecation was about once per week in 9 (30%) participants and once every 2 to 3 days in 21 (70%) participants. The mean urinary 3-IS level before the intake of the test article was 141.0 ± 60.9 (mean ± standard deviation [SD]) μg/mg Cr), which was higher than the national average level (45.1 μg/mg Cr).

Table 1 Profile of Participants Enrolled in This Study

Figure 1 Trial participant tracking flowchart.

Changes in Urinary 3-IS

Figure 2A shows changes from the initial urinary 3-IS level and how ingestion of the test article gradually decreased these levels. After 4 weeks, urinary 3-IS decreased 25% from initial levels, which was statistically significant (p < 0.01). Changes in urinary 3-IS showed a high correlation to the initial 3-IS level (Figure 2B). Pearson’s correlation coefficient was 0.74 (p < 0.001).

Figure 2 Changes in urinary 3-indoxyl sulfate levels.

Abbreviation: Cr, creatinine.

Notes: (A) Change with time from start of ingestion of the test article (n = 30). Statistical significance was determined using paired t-tests with Bonferroni correction coefficient. Significant differences from the initial values: **p < 0.01. Error bars indicate standard error. (B) Relationship between the initial urinary 3-indoxyl sulfate levels and the amount of change. Pearson’s correlation coefficient was 0.7407 (p < 0.001).

Furthermore, we analyzed changes in urinary 3-IS by categorizing the initial 3-IS levels (Table 2) into three groups: low level (<100 μg/mg Cr; n = 8), middle level (100–150 μg/mg Cr; n = 10), and high level (>150 μg/mg Cr; n = 12). In the high group, urinary 3-IS significantly decreased and the decrease observed at the fourth week was larger than that of the second week. In the middle group, a general decreasing trend was observed. However, in the low group, very little change was observed.

Table 2 Hierarchical Analysis of Changes in 3-Indoxyl Sulfate Values from the Initial 3-Indoxyl Sulfate Values

Changes in the Indexes Related to Defecation

From the questionnaire surveys completed during the test period, questions specific to the CAS were extracted and analyzed. It was observed that the CAS score had decreased by the second week after LEX ingestion and continued into the fourth week (Figure 3A). No significant changes were observed in all subjects in the number of bowel movements, the amount of defecation, and odor during defecation. This is not surprising as the average number of defecations per week from the start of the test was 5.87, which did not represent constipation tendencies.

Figure 3 Changes in the constipation assessment scale and self-assessment of physical condition.

Abbreviation: CAS, Constipation Assessment Scale.

Notes: (A) CAS score. (B) Physical condition score. The score range is 0–24 points for the CAS and 0–30 points for the physical condition score, with lower scores being better. Statistical significance was determined using the Wilcoxon signed-rank test with Bonferroni correction coefficient. Significant differences from the initial values: *p < 0.05, **p < 0.01, ***p < 0.001. n = 30.

Therefore, only those with constipation tendencies (defecation four times or less per week; n = 10) were analyzed. Within this group, a significant increase in the number of defecations was observed. Similarly, regarding stool volume, when the single defecation volume was 1.5 or less, a significant increase in stool volume (single defecation) was observed between the first and fourth weeks. Lastly, a significant improvement was observed by those who had bad stool odor (Table 3).

Table 3 Changes in the Number of Defecations, Stool Volume, and Stool or Flatulence Odor During the Test Period

Changes in Other Physical Conditions

During the test period, in addition to the abdominal symptoms questionnaire, we asked the participants to report on six items regarding skin condition, sleep quality, refreshment upon awakening, mood, appetite, and body tone on a scale of 1–5. The total score of the six items statistically improved by the second week after ingestion of the test article and continued into the fourth week (Figure 3B). Of the six items, the scores for skin condition, sleep quality, and feeling of refreshment upon awakening in the morning significantly changed, and that for body tone also tended to change (Table 4).

Table 4 Changes in  Each Items of Phisical Condition  During the Test Period

Correlation Between Urinary 3-IS and Physical Condition

A modest degree of correlation between urinary 3-IS levels and overall physical condition, including CAS score, was observed (Figure 4A) for which the Pearson’s correlation coefficient was 0.21 (p < 0.05). Moreover, a correlation between the scores for overall physical condition and the feeling of refreshment during defecation (Figure 4B) was observed in addition to a correlation between the single defecation volume and the feeling of refreshment (Figure 4C). The Spearman’s rank correlation coefficients were 0.31 (p < 0.01) and 0.51 (p < 0.001), respectively.

Figure 4 Correlation plot of several test parameters.

Abbreviations: Cr, creatinine; CAS, Constipation Assessment Scale.

Notes: (A) Urinary 3-indoxyl sulfate versus self-assessment of physical condition, including CAS. Pearson’s correlation coefficient was 0.2135 (p = 0.043). (B) Self-assessment of physical condition within the CAS vs the feeling of refreshment during defecation. Spearman’s rank correlation was 0.3120 (p = 0.003). (C) Stool volume (single defecation) vs the feeling of refreshment during defecation. Spearman’s rank correlation coefficient was 0.5193 (p = 0.001).


To the best of our knowledge, this is the first study that assessed urinary 3-IS levels as an index of change in the intestinal environment in combination with LEX ingestion. This study showed that the regular ingestion of LEX resulted in an improvement in urinary 3-IS levels. The findings of this study add to existing evidence that LEX is beneficial for individuals with high 3-IS levels due to deterioration of their intestinal environment. However, since this was a pilot study and did not have a control, or placebo, group, the observed beneficial effects may be due to the placebo effect. Therefore, a study with a placebo or control group needs to be conducted. However, it is worth noting that the urinary 3-IS level correlated with the self-assessed physical condition index and that both the 3-IS level and the physical condition index improved due to the ingestion of LEX. While these correlations are very interesting, the results for this study only represent the effects on LEX on 30 women, and a more conclusive study would need a larger sample group with multiple genders.

Levels of urinary 3-IS are a simple and efficient screening tool for the presence of gut bacterial dysbiosis. Common microbes that have been found to affect urinary 3-IS test levels include Salmonella, Shigella, Campylobacter jejuni, Yersinia enterocolitica, Citrobacter freundii, Citrobacter diversus, Klebsiella pneumoniae, Pseudomonas aeruginosa, Staphylococcus aureus, some strains of Bacteroides and Escherichia coli, Clostridium difficile, Candida albicans, and other Candida species. This study did not directly analyze changes in gut microbiota composition; however, it is possible that these bacterial groups may have altered and thus affected changes in the metabolism of Trp. An analysis of change in intestinal bacteria would also be an important factor for a future study. In preliminary studies, ingesting LEX increased the amount of Bifidobacterium spp. and phyla Bacteroidetes and decreased the ratio of the phyla Firmicutes.25 Another study observed a decrease in both the phenylalanine-derived 3-(3-hydroxyphenyl)-3-hydroxypropionic acid (HPHPA) as a urinary clostridial marker and Trp metabolites (5-hydroxyindoleacetic, quinolinic, and kynurenic acid) (unpublished data).31 From this, it can be suggested that ingesting LEX causes changes in the intestinal microbiota and affects Trp metabolism.

Trp not only functions as a nutrient enhancer but also plays an important role in balancing the intestinal tolerance of microbiota and their maintenance. Recent studies have underscored that changes in the microbiota modulate the host’s immune system by controlling Trp metabolism. Bacterial Trp metabolites, such as indole and indoleic acid derivatives, can affect intestinal barrier integrity and immune cells by activating pregnane X receptors (PXRs) or aryl hydrocarbon receptors (AhRs).32–34 Since the gut microbiota directly affects the types and levels of Trp metabolites, it subsequently regulates the mucosal immune response or mucosal integrity through AhRs or PXRs, respectively. In addition, bacterial Trp metabolites can regulate the production of IL-22, which plays a key role in intestinal homeostasis through AhRs.34

3-IS originates from indole catabolized by tryptophanase, which can be induced by Trp or repressed by glucose in most bacteria. Recently, indole has been recognized as a signaling molecule that regulates bacterial motility, biofilm formation, antibiotic resistance, and persister cell formation. Indole also affects virulence, which plays a role in affecting host cell invasion by other non-indole-producing species, such as Salmonella enterica and P. aeruginosa, and even the yeast C. albicans.35 Changes in urinary 3-IS due to the ingestion of LEX can therefore be considered changes in Trp metabolism, and various Trp metabolites, including indole, may directly or indirectly affect the intestinal tract.

3-IS is a typical uremic toxin and is normally excreted in urine. However, it can accumulate in blood if urine output slows due to decreased renal function. In fact, 3-IS is frequently implicated as a contributor to the progression of renal and vascular diseases. Studies have suggested that 3-IS also has adverse effects on bones, the central nervous system, and cardiovascular functions.36,37 Since the dialytic clearance of 3-IS is much lower than its kidney clearance, 3-IS accumulates in relatively high plasma levels in hemodialysis patients. In a small number of cases, the continuous ingestion of LEX by patients undergoing hemodialysis resulted in decreased blood 3-IS and blood urea nitrogen levels.38 The accumulation of 3-IS in blood depends on intestinal-derived indole, and the results of these patients are consistent with the results of this study. Thus, ingesting LEX may be effective for individuals with chronic renal failure.


In conclusion, oral ingestion of LEX for 4 weeks decreased urinary 3-IS levels in women with high urinary 3-IS levels and improved the defection status of constipated women. A correlation between the self-assessment of overall physical condition and urinary 3-IS level was also observed. The results indicated the efficacy of oral ingestion of LEX on the intestinal environment and the efficacy of monitoring urinary 3-IS to observe changes in the intestinal environment and physical condition.


We would like to thank all participants and applicants who took part in the study. We appreciate Healthcare Systems Co., Ltd. for their technical assistance in conducting urine analysis. Furthermore, we give special thanks to Mizukoshi R. and Sato T. (B&S Corporation Co., Ltd.) for their assistance in setting up the test. Additionally, we would like to thank Enago for the English language review.


This study was funded by B&S Corporation Co., Ltd.


MF, RM, and YS receive compensation from B&S Corporation Co., Ltd. TY and MM receive compensation from Healthcare Systems Co., Ltd. KF has no conflicts of interest directly relevant to the content of this article. The authors report no other conflicts of interest in this work.


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